Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0358 ATGGAGCGACGTTGGCCGTGGAAGAAGAAGTCGTCTGATAAGGTCGTGAATGAGAAATCAGGTGGTTTCGTAGATTCCGAGGATGCTTCCAATCAGGATAACAACAAGAAATCGAATTATGTTCAAATCTCTGTGGAATCGTATTCGCATCTGTCTGATTTGGAGGATCAAGTGAAGTCGTATGAGGAAAAAGTGAAGACGTATGACAAACAAGTTCAGACGTATGAGGAAAAGGTTCAGACACTGGAAGATGAGATCAAGGAAATGAATGAAAAGCTTTCGGTAGCAAACACTGAGATCAATACTAAGGAAAGCATGGTAAAACAACATGCTAAAGTAGCCGAAGAAGCTGTTTCAGGATGGGAAAAGGCTGAAGCGGAGGCTTTGGCGTTGAAAGATCATCTGGAATCTGTCACTCTTTCGAAACTCACTGTTGAGGACCGTGCGTCACATTTAGATGGTGCTCTTAAAGAGTGTATGCGACAGATACGTAACCTTAAGGAAGAACATGAACAGAAAATACAGGAAGTTGCTCTGTCGAAAACGAAGCAGTTGGACAAGATTAAGGGAGAGCTAGAGGCTAATATAACTAGTTTTGAACAGAAACTCCGGAGGTCTGCTGCGGAAAATGGAGCGTTGTCGAGGTCCTTGCAGGAGCGGTCTAACATGCTAATCCAAATAAGCGAAGAAAAAGCTCGTGCCGAAGCTGAAGTTGAGCAGCTTAAGAGCAACGTAGAATCATGTGAAAGAGAAATTAATTCACTTAAATATGAACTTCATGTTTCTTCCAAAGAGCTTGAAATTCGGAATGAAGAAAAAAACATGAGTATGAGGTCTGCAGATGCGGCTAACAAGCAGCATATGGAGGGTGTAAAGAAAATTGCTAAGTTGGAAGCTGAGTGCCAAAGACTACGCGGACTAGTTCGGAAAAAGTTACCTGGTCCGGCCGCACTTGCACAAATGAAGCTAGAAGTTGAAAATCTTGGTCGAGATTATGGAGAAAGTCGAATTAGGAAATCACCTGTGAAGCCTGCTACCCCTAATCCTTCCCCACTACCTGAATTCTCCCTAGAGAATGTACAGAATTTCCAGAAGGAGAATGAATTTCTTACCGAGCGTTTATTTGCGATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCTAAACGGAACAGCGAATTGCAGGCCTCAAGGAGTATGTGTGCTAAAACACTGAGCAAACTTCAAAGTTTGGAAGCACAACTTCCGACAAGTAACCAGCAGAATGGATCTCCGAAATCCATCATGCATGTAACCCATGAAAGCATTTATAGTCAAAATGCAAGCATTGCACCAAGCTTGGTTTCCGTGTCTGAAGATGGGAATGATGATGCAGGAAGTTGTGCCGAGTCTTGGAATACAACAATAGCATCCGGGCCGTCCCCCCAAGTTTCTAAAAAGTGTACCGAGGAATCAAGCAAATCCGAAGCCATTCAAAAGTTGGAACTAATGGACGACTTTCTGGAGGTGGAGAAGTTAGCTCGTCTGCAAATTGATTCCAACATAGACACCACAGTTTCATTATCTTCAAACAATAAGGCAACTGATGGTGTGGTCAATGATATATCACAAGTCAGTACTGGTAAAGTTGGCCTGTCTGAAACAAACGGCGATTCAAATTCGTTGCCAAATCAAGTGTCTTCCAGTGCTTCAATGTCAGCACCTGATCCCCAATCTGATGTTGTTAGCTTATTAACAAATCTTAGATCAAGAATATTACTAGTTTTTGAGTCCGATACTAAGAATGCTGATATAGGAAAGATCGTTGAGGATATTAAACACGTTCTTGATGATTCGCATGACACTGCCCCTTCTGAAGCCACATGTGATCGGCAGAATAATCTTGAAGATGCTGGCTTAAACCTTGAAAATGAAACAATTTCAACCCTGCAGCCCAAAGAATATGCGCAGATAACTTCAGATTTAGAAGCTGCAATTTCTCATATCCATGACTTTGTATTGTTACTTGGCAAAGAAGCAATCCCATTTCATGATGTATCTTCTAATGGAAATGAAATGAGCAAAAAGATTGAGGAGTTTTCTGTCACCTTTAGTAAAGTTTTATGCAGCAATGCAAGAATGTCACAGTTTGTTCTTGACCTGTCTTACGTTTTGGCTAAAGCCAGTGAACTCAGATTTAGTGTCCTTGGCTACAAGGGTACAGAAGCCGAAACTAACAGTCTCGATTGCATAGATAAGATTGCGTTGCCTGAAAATAAGTTAGTTCAAGAAAATTCATCCGGAGAAAGGTATCAAAATGGTTGCTCTCGTGTTCTTAACCCCGAGGTTCCTGATGATGGAAATTTGGTTTCGGGCTATAATGCGAATGTGGCATCACAAAAACTGTCATCCGAGGAATTTGAAGAATTGAAACTCGAGAAAGAGAAAGTAACAACAGATCTATCAATATGTGCTGAGAATCTTGAAGTGACCAAGTCTCAATTGCTAGAAACTGAGCAACTTCTAGCAGAAGTCAAATCACAACTAGCTTCTGCTCAAAGATCAAATAGCTTAGCTGAGACGCAGCTGAAGTGTATGACAGAGTCGTACGAATCACTTGAAACACGTGCCCAGGAGTTCGAAGCTGAACTAAACCGTTTGAAAAGTACGATAGAAACTCTGGAGAATGAGCTTCAAGATGAAAAGAAGGCTCACGAAGCTGCTTTGGCGAAGAGCAAGGAGTTCGAGGAGCAGTTACTAAGGATCGAGAGCTTAACAGCTGAAAATGACAACAAGTCTTCAAAGGAGAGAGATTTGGCAGCCGCGGCCGAAAAGCTAGCGGAGTGTCAAGAAACCATATTCCTTCTGGGAAAGCAGTTAAATGCTATCCATCCTCAAAGTCCAAAGTTTGAAGGCTTCAACCCAATGAATCAAACTGCTACTACTAGCCCAAATTCTCAAGAAGTAGTTCAGTTGGAGATGGACAGTGCCACTTCTTCTTTTGTGCAAAGACCGAGTTCAGATTCTCCCTTGCATTTTTCCAATGGTTTATTTGTTCCATCAGATAATGATTCAAACGTACCGGTACCGGTACAGGCCAGATCCCCGACACCACTTCCGAAATCAAAACCAAAACACAGACCTTCGAAATCAGCCTCTTCAACTGGTTCGGTCACTACGCCGGAGAAACATGGGCGGGGATTTAGTAGATTCTTTTCATCAAAAGGGAAGCCTGGTTATTGA 3225 0.4211 MERRWPWKKKSSDKVVNEKSGGFVDSEDASNQDNNKKSNYVQISVESYSHLSDLEDQVKSYEEKVKTYDKQVQTYEEKVQTLEDEIKEMNEKLSVANTEINTKESMVKQHAKVAEEAVSGWEKAEAEALALKDHLESVTLSKLTVEDRASHLDGALKECMRQIRNLKEEHEQKIQEVALSKTKQLDKIKGELEANITSFEQKLRRSAAENGALSRSLQERSNMLIQISEEKARAEAEVEQLKSNVESCEREINSLKYELHVSSKELEIRNEEKNMSMRSADAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGRDYGESRIRKSPVKPATPNPSPLPEFSLENVQNFQKENEFLTERLFAMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAQLPTSNQQNGSPKSIMHVTHESIYSQNASIAPSLVSVSEDGNDDAGSCAESWNTTIASGPSPQVSKKCTEESSKSEAIQKLELMDDFLEVEKLARLQIDSNIDTTVSLSSNNKATDGVVNDISQVSTGKVGLSETNGDSNSLPNQVSSSASMSAPDPQSDVVSLLTNLRSRILLVFESDTKNADIGKIVEDIKHVLDDSHDTAPSEATCDRQNNLEDAGLNLENETISTLQPKEYAQITSDLEAAISHIHDFVLLLGKEAIPFHDVSSNGNEMSKKIEEFSVTFSKVLCSNARMSQFVLDLSYVLAKASELRFSVLGYKGTEAETNSLDCIDKIALPENKLVQENSSGERYQNGCSRVLNPEVPDDGNLVSGYNANVASQKLSSEEFEELKLEKEKVTTDLSICAENLEVTKSQLLETEQLLAEVKSQLASAQRSNSLAETQLKCMTESYESLETRAQEFEAELNRLKSTIETLENELQDEKKAHEAALAKSKEFEEQLLRIESLTAENDNKSSKERDLAAAAEKLAECQETIFLLGKQLNAIHPQSPKFEGFNPMNQTATTSPNSQEVVQLEMDSATSSFVQRPSSDSPLHFSNGLFVPSDNDSNVPVPVQARSPTPLPKSKPKHRPSKSASSTGSVTTPEKHGRGFSRFFSSKGKPGY* 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0358 1074 Coils Coil 926 946 - -
Psa5g0358 1074 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1073 - -
Psa5g0358 1074 Coils Coil 822 912 - -
Psa5g0358 1074 Coils Coil 217 258 - -
Psa5g0358 1074 MobiDBLite consensus disorder prediction 1 16 - -
Psa5g0358 1074 Coils Coil 149 183 - -
Psa5g0358 1074 MobiDBLite consensus disorder prediction 1 38 - -
Psa5g0358 1074 SUPERFAMILY Tropomyosin 799 955 - -
Psa5g0358 1074 MobiDBLite consensus disorder prediction 24 38 - -
Psa5g0358 1074 SUPERFAMILY Tropomyosin 51 269 - -
Psa5g0358 1074 Coils Coil 280 300 - -
Psa5g0358 1074 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 1073 - -
Psa5g0358 1074 Coils Coil 51 106 - -
Psa5g0358 1074 Pfam Filament-like plant protein, long coiled-coil 103 961 IPR008587 -
Psa5g0358 1074 Coils Coil 189 209 - -
Psa5g0358 1074 Gene3D - 28 121 - -
Psa5g0358 1074 Coils Coil 360 380 - -
Psa5g0358 1074 MobiDBLite consensus disorder prediction 1016 1074 - -
Psa5g0358 1074 MobiDBLite consensus disorder prediction 543 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0358 Psa-Chr5 26090097 26095130 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0358 - - gmx:100782834 1527.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0358 5 26090097 26095130 Psa5g0358 5 26090097 26095130 ECH