Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0348 ATGGAAGTCGAAGAGGAAGAAGCAAACACAGTTGAGAGGATTTTTGTTGCGATCAGAGTAAGGCCTTTGAACGAAAGAGAAAAAGCGAGACAAGATGTATCGGATTGGGAATGTGTTTCTCATAATAGCGTCAGATTGAAGAACAATGGCCATGCCGAACTTCGACCGGCCGATGCATATATATTTGATAGGGTATTTGGGGAAAAGTGTCCAACTAAGCAAGTGTATGAGCAAGGGATTAAAGATGTTTCCCTTTCGGTAGTTAGGGGTATCAACTCTAGCATTTTCGCATACGGGCAAACAAGCAGTGGAAAGACATATACCATGTCGGGAATTACTGAACTTGCCGTGAGGGATATATATGAATACATAGAAAAGCATAAAGAAAGAGAGTTTATTGTGAAGTTCTCTGCCATGGAAATATATAATGAAGCTGTGAGAGACCTTCTCAATTCAAATGCTACCACATTAAGACTCCTTGATGATCCAGAGAAAGGGACTATTGTTGAGAAACTTACTGAGGAGACTCTGACAGAGAGAAGTCGGTTGCAGCAACTTATATCAAAATGTGCAGCTGAAAGGACAACGGAAGAGACTGCCATGAATGAAACAAGCTCCAGATCTCATCAAATTCTTCGACTGACAGTTGAAAGCAGTCCAGGTGATTTTGTAGGCACTGCAAGATCTGGTGCACTTTTTGCCAGTGTGAATTTTGTGGATCTAGCAGGAAGTGAGCGTGCTTCTCAAGCATTATCAGCAGGCACAAGATTGAGAGAAGGTAGCCACATAAATCGCAGTTTACTGACCCTTGGAACAGTAATCAGGAAACTAAGCAAGGAAAGAAATGGGCACATACCTTACAGAGACTCTAAGCTTACTCGCATTCTGCATAACTCTTTAGGAGGCAATGCCAGAACAGCCATCATATGTACAATTAGTCCTGCCCGCAGCCAAGTTGAGCAATCAAAAAATACTCTATTTTTTGCTGGTTGTGCAAAACAGGTGACTACTAATGCTCGGGTCAACGTCGTGATGTCAGACAAGGTTTTGGTTAAGCAACTACAAAAGGAATTGTCTAGAATGGAGGATGAGTTGAAGAGCTTAAATACCGTCATATTAAAGGAAAGGGAACTTCAGATAAAACAGATGGATAAGGAAATTAAAGAATTGACCCGGCAACGTGATCTCTTTAAAAATTTGCTCCAATCAGTTGGGAAAGATGGGGTTTTAAGAGTAGGTCAAGAATGGGCCTCAGAATGGTCAGGCGTTGCTAATGATCCTAGTCCAGTTAGATGCATCAATTCTGAGCATTTTAATAGAACAACATCCATTTCGTCTATTTCTAATGAGCACCTTTTCAAGCAATCTGAGAATTCTGAAGACAACTTTCTCTTGGATGGATGTCCTCCCACGTTTGTTGGGCCTGATCCATGTCAAGGTTGGGAGGAAATGGATAGGAGATCTGAATCTGAAGATAACTGCAAGGAAGCGCCGTGCATTGAAATAAAAGAAGTGGAAACAGAGCACAAAACAGATAATGTGTCCATTCCTGCTTTTGAAGAAAGTGAAAGAAATTCGCCCGTGATTCAATTTAAGGAAGTAGACGACAGATCATCCTCAGTGAATGGGCATAGTGATCAAGATGCACTTCAGCAAAACACTGAGGACATTAAAAGGACCAAGGACCATCTTGTGGACCTCTCAGAAAAATATAATGAGACATTTGAATCCAAATCTAGTTGCTTGGCTGCCATGTCTCCTCAAGTAGGTAAGGTTGATCAGGAAGATTCACCACATTCTCAATTCGGTAAGTTGGAGCAGAATGTGTCACCTCCTTCGTTTAATAAGCTAGACCAGGAATCCACATCACCTCTTCAGTCTGATCAGGGAGAGCTTAAAACTGTGTCACCTCCCGACCATGATGATCTGGACCAATCTGATCAGGAATCCACATCACCTCTTCAGTCTGATCAGGAATCCACATCACCTCATCAGTTTGATCAGGAATCCACATCACCTCATCAGTTTGATCAGGAATCTGCATCACCTCCTCAATCTGATCTGGAAGAGCTTAAAACTGTTTCACCTCCTGAACTTGATGATCTGGAACAAGTATCATTCAAATCACCGGCTGGCGTTGATAAGGAATATTCTACTAATTTGGAATGCTTTCCTGAGAAGCTATTCGAACCGAAGTTACGCGCTAAAAGAAGAAAATCTTCCCGAAAATCTTCTCTAATTCACAAGATGAATGCTTCAGTGGAAGATGCAGAATCTGTTTTGGATTCTGATACAGAGGAAACTGCCAGCGTCCTAAATTTTGAAGCAAGAATGAATGAAAGTAAGCCAGAACCAGTGGACATGGACATTAATAATCTTATGGTACCTGTGAGCACGCCTCGGATCAATACAAATGTGAACAGAGTAAAAGGTTTCAGTTCCCCCGGAGTTTGGGGGGATTTAATACCCTCTAAATTTGAGATGCAGCAGAAAGATCTAATCGAACTTTGGGATACATGCAATGTGCCACTTGTACATAGGTCCTATTTTTTCCTTCTCATCCAAGGTGAACTTTCGAATTCTGTGTACTTGAATGTAGAGCTCAGACGTTTGTCCTTTTTAAAGGATGCTTTTTCAAGCGGACATTACATTACAGGAGAAGAAGGTCTTGACGTCACACCTAATTCAAGCCTCGCGTCTCTGACTCGTGAGAGAAAAATGCTCAGTAAGCAAGTGCATAAAAAGTTTTCAAGGAGGGAAAAAGAGGAACTATACCTGAAGTGGGGTATTGATTTGAAGACCAAGCTCAGAAGTACACAATTGGCATGGCTCGTATGGACAGATACAAGAGATTTGAACCACATAAGAGAAAGTGCTGCACTTGTTGGGAAGCTGGTTGGTTTTATTAACACCGGCGAGGCCTCAAAGAAAACTTTTGGACTTGGCTTCTTAGTCTGA 2958 0.4168 MEVEEEEANTVERIFVAIRVRPLNEREKARQDVSDWECVSHNSVRLKNNGHAELRPADAYIFDRVFGEKCPTKQVYEQGIKDVSLSVVRGINSSIFAYGQTSSGKTYTMSGITELAVRDIYEYIEKHKEREFIVKFSAMEIYNEAVRDLLNSNATTLRLLDDPEKGTIVEKLTEETLTERSRLQQLISKCAAERTTEETAMNETSSRSHQILRLTVESSPGDFVGTARSGALFASVNFVDLAGSERASQALSAGTRLREGSHINRSLLTLGTVIRKLSKERNGHIPYRDSKLTRILHNSLGGNARTAIICTISPARSQVEQSKNTLFFAGCAKQVTTNARVNVVMSDKVLVKQLQKELSRMEDELKSLNTVILKERELQIKQMDKEIKELTRQRDLFKNLLQSVGKDGVLRVGQEWASEWSGVANDPSPVRCINSEHFNRTTSISSISNEHLFKQSENSEDNFLLDGCPPTFVGPDPCQGWEEMDRRSESEDNCKEAPCIEIKEVETEHKTDNVSIPAFEESERNSPVIQFKEVDDRSSSVNGHSDQDALQQNTEDIKRTKDHLVDLSEKYNETFESKSSCLAAMSPQVGKVDQEDSPHSQFGKLEQNVSPPSFNKLDQESTSPLQSDQGELKTVSPPDHDDLDQSDQESTSPLQSDQESTSPHQFDQESTSPHQFDQESASPPQSDLEELKTVSPPELDDLEQVSFKSPAGVDKEYSTNLECFPEKLFEPKLRAKRRKSSRKSSLIHKMNASVEDAESVLDSDTEETASVLNFEARMNESKPEPVDMDINNLMVPVSTPRINTNVNRVKGFSSPGVWGDLIPSKFEMQQKDLIELWDTCNVPLVHRSYFFLLIQGELSNSVYLNVELRRLSFLKDAFSSGHYITGEEGLDVTPNSSLASLTRERKMLSKQVHKKFSRREKEELYLKWGIDLKTKLRSTQLAWLVWTDTRDLNHIRESAALVGKLVGFINTGEASKKTFGLGFLV* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0348 985 MobiDBLite consensus disorder prediction 601 633 - -
Psa5g0348 985 MobiDBLite consensus disorder prediction 648 689 - -
Psa5g0348 985 Gene3D Kinesin motor domain 3 366 IPR036961 -
Psa5g0348 985 SMART kinesin_4 11 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0348 985 Coils Coil 344 400 - -
Psa5g0348 985 MobiDBLite consensus disorder prediction 586 704 - -
Psa5g0348 985 CDD KISc_CENP_E 14 335 - -
Psa5g0348 985 ProSitePatterns Kinesin motor domain signature. 234 245 IPR019821 GO:0003777|GO:0005524|GO:0007018
Psa5g0348 985 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 371 IPR027417 -
Psa5g0348 985 PANTHER KINESIN-LIKE PROTEIN KIN-7J 9 983 - -
Psa5g0348 985 MobiDBLite consensus disorder prediction 534 561 - -
Psa5g0348 985 Pfam Domain of unknown function (DUF3490) 825 984 IPR021881 -
Psa5g0348 985 Coils Coil 550 570 - -
Psa5g0348 985 PANTHER CENTROMERE PROTEIN E 9 983 - -
Psa5g0348 985 Pfam Kinesin motor domain 19 335 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0348 985 ProSiteProfiles Kinesin motor domain profile. 13 335 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0348 985 PRINTS Kinesin heavy chain signature 90 111 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0348 985 PRINTS Kinesin heavy chain signature 199 216 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0348 985 PRINTS Kinesin heavy chain signature 235 253 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0348 985 PRINTS Kinesin heavy chain signature 285 306 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0348 Psa-Chr5 25140744 25149430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0348 12 372 Miscellaneous Gene Families AT5G06670 42.818 2.29e-80 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0348 K11498 - gmx:100802097 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0348 5 25140744 25149430 Psa5g0348 5 25140744 25149430 ECH