Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0343 ATGGCGGAAGAAATTAGGCAAAACGACGTCGCTTCATCTTCCAAATCTAGAAGCTTCTGGTCTTCACTCCGTTGGATTCCCACTTCTACCGATCATATCATCGCCGCCGAGAAACGCCTTCTCTCCATTATCAGAACTGGGTATGTTCAAGAGCGTGTTAATATAGGCTCTGGTCCTCCTGGGTCCAAAGTAAGATGGTTCCGTTCATCGAGCGATGAGCCACGGTTTATCAACACGGTTACTTTTGACAGTAAACCTGATTCTCCTACGCTTGTTATGGTTCATGGATATGCTGCTTCCCAGGGTTTCTTCTTTCGGAATTTTGATGCTCTCGCTTCTCGTTTCAGAATCATTGCTGTTGATCAACTTGGTTGGGGCGGATCAAGTAGGCCTGACTTTACATGCAAAAGTACTGAAGAAACTGAGGCGTGGTTCATTGATTCTTTTGAGGAATGGAGAAAAGCCAAAAATCTGAGCAATTTCATATTACTTGGACATTCTTTTGGTGGTTATGTTGCTGCCAAATATGCACTCAAGCACCCTGAGCATGTACAACACTTAATTTTGGTGGGACCAGCTGGGTTTACATCAGAATCAGATGCAAAGACTGATTTTATTGCAAAGTTCCGAGCGACATGGAAGGGAGCAGTTCTGAATCATCTATGGGAATCTAATTTTACACCTCAAAAAATTGTCAGAGGTTTAGGTCCTTGGGGTCCAAACATGGTGCGCAAATATACAAGTGCTAGGTTTGGTACACATTCAACCGGGCAAAAACTGTTTGAAGAAGAATCAAGTTTGCTAACAGATTATGTTTATCATACATTGGCGGCAAAAGCTAGTGGTGAGCTATGCTTAAAATATATTTTTGCATTTGGAGCATTTGCTAGGATGCCCCTTCTTCACAGTGCTCCAGAGTGGAAGGTGCCTACCACATTCATATATGGTTTTGAAGATTGGATGGATTATGAAGGTGCCCAAAAAGCTCGCGCACAAATGAAAGTTCCATGTGAAATTATCAGGGTCCCTCAGGCTGGACATTTTGTGTTCATCGACAACCCAAGTGGCTTCCATTCAGCTGTGTTTCATGCTTGTCGAAGGTTTCTTACACCTGATCCGGACAATGAATCTCTTCCTGAAGGGCTATCCTCTGCATAA 1158 0.4326 MAEEIRQNDVASSSKSRSFWSSLRWIPTSTDHIIAAEKRLLSIIRTGYVQERVNIGSGPPGSKVRWFRSSSDEPRFINTVTFDSKPDSPTLVMVHGYAASQGFFFRNFDALASRFRIIAVDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFTSESDAKTDFIAKFRATWKGAVLNHLWESNFTPQKIVRGLGPWGPNMVRKYTSARFGTHSTGQKLFEEESSLLTDYVYHTLAAKASGELCLKYIFAFGAFARMPLLHSAPEWKVPTTFIYGFEDWMDYEGAQKARAQMKVPCEIIRVPQAGHFVFIDNPSGFHSAVFHACRRFLTPDPDNESLPEGLSSA* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0343 385 PANTHER RE40534P-RELATED 9 372 - -
Psa5g0343 385 PRINTS Alpha/beta hydrolase fold signature 114 129 IPR000073 -
Psa5g0343 385 PRINTS Alpha/beta hydrolase fold signature 163 176 IPR000073 -
Psa5g0343 385 PRINTS Alpha/beta hydrolase fold signature 177 190 IPR000073 -
Psa5g0343 385 PRINTS Epoxide hydrolase signature 114 129 IPR000639 GO:0003824
Psa5g0343 385 PRINTS Epoxide hydrolase signature 177 190 IPR000639 GO:0003824
Psa5g0343 385 PRINTS Epoxide hydrolase signature 309 325 IPR000639 GO:0003824
Psa5g0343 385 PRINTS Epoxide hydrolase signature 342 364 IPR000639 GO:0003824
Psa5g0343 385 PANTHER BNAA01G13630D PROTEIN 9 372 - -
Psa5g0343 385 SUPERFAMILY alpha/beta-Hydrolases 79 361 IPR029058 -
Psa5g0343 385 Gene3D alpha/beta hydrolase 75 369 IPR029058 -
Psa5g0343 385 Pfam alpha/beta hydrolase fold 89 354 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0343 Psa-Chr5 24545235 24549650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0343 69 196 Acyl Lipid Metabolism Gene Families AT1G64670 32.117 3.77e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0343 - - gmx:100791981 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0343 5 24545235 24549650 Psa5g0343 5 24545235 24549650 ECH