Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0325 ATGGAAATTGAGCAGCAAGTACCCATCCTCATCAAGTCTAGATTCAAAAGCATATGTGTTTACTGTGGAAGCAGTCCAGGAAAAAATCCTAGCTACCAAATTGCTGCTATTCAGCTCGGAAAACAATTGGTGGAAAGGAAGATTGACTTGGTGTATGGAGGAGGAAGTATAGGATTGATGGGTCGTATCTCGCAAGTTGTTTATGATGGTGGATGTCACGTGTTAGGAATCATTCCAAAAACACTTATGCCAAAAGAGATAACCGGTGAGAGTGTGGGAGAAGTGAGAGCTGTATCAGGGATGCACCAACGCAAAGCTGAAATGGCGAAACAAGCTGATGCTTTTATTGCCATGCCAGGTGGATATGGCACACTGGAAGAATTACTGGAAATTATTACCTGGGCTCAACTTGGCATCCATGATAAACCTGTGGGGTTATTGAACGTGGATGGTTACTACAACTCGTTGCTGGCATTCATGGACAAAGCTGTGGAAGAAGGTTTTGTAACACCAGCTGCCCGTCACATTATTGTATCTGCCCAAACTGCCCAAGACCTCATGTGCAAACTTGAGGAATATGTTCCTGAGCATTGTGGTGTGGCTCCGAAGCTAAGTTGGGAGATGGAACAACAGTTGGTTAACACAGCAAAGTCAGATATTTCTCGTTGA 669 0.441 MEIEQQVPILIKSRFKSICVYCGSSPGKNPSYQIAAIQLGKQLVERKIDLVYGGGSIGLMGRISQVVYDGGCHVLGIIPKTLMPKEITGESVGEVRAVSGMHQRKAEMAKQADAFIAMPGGYGTLEELLEIITWAQLGIHDKPVGLLNVDGYYNSLLAFMDKAVEEGFVTPAARHIIVSAQTAQDLMCKLEEYVPEHCGVAPKLSWEMEQQLVNTAKSDISR* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0325 222 Gene3D - 9 192 - -
Psa5g0325 222 SUPERFAMILY MCP/YpsA-like 14 193 - -
Psa5g0325 222 Pfam Possible lysine decarboxylase 60 189 IPR031100 -
Psa5g0325 222 PANTHER LOG FAMILY PROTEIN YJL055W 9 218 - -
Psa5g0325 222 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 9 218 - -
Psa5g0325 222 TIGRFAM TIGR00730: TIGR00730 family protein 16 193 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0325 Psa-Chr5 23112566 23114868 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0325 K22522 - gmx:100782787 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0325 5 23112566 23114868 Psa5g0325 5 23112566 23114868 ECH