Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0293 ATGGAGATGAAGAAAGGAGTTGAAACTGTGGTGATTAATAATGGAAACTTTGTGGAAGAAGAAGAACTCTCGAGCTGTAAATTCTCGCATCTTCTTGCTTCCAAGGATCGTGATTTTCTTCTATCTTCAACTGGAGCTCAGGTTAAAGTTTCAGAACTTGAAGGAAAAGTAGTGGGATTATTATTCGCTGCCAACTGGTACCCACCATGTCGTGGATTCACCCAGTTGCTCATTGGAATATACCAACAACTGAAAACAAATATCCCTTCCTTTGAAATAGTTTATGTATCTTCTGATGAAGATTTAGATGCTTTTAATGGATTCTACCAAAACATGCCATGGCTTGCAGTTCCTTTCTCTGATTTAGAAACAAAGAAAGCATTGAACAGAAAGTACGAAGTCGAAGGTATTCCGTGTTTGGTTATGTTGCAACCTGATGATAGTAAAGGTGAAGCTACACTTCGCGATGGTGTTGAGCTTATTTATCGATACGGCGTTCAAGCTTTTCCGTTTAGTAAAGAGAGGTTGGAGGAATTGCATGATGCTGAGAGGGAGAAGCTTGAGAATCAAACTCTAGCTAATTTGCTAGGAAACAATAATAGAGATTATGTTTTCAGTCACACAAATGGATTACTCACACAGGTACCTGTTACTTCTTTAGTAGGCAAAACTATTGGACTATACTTTTCAGCTGGATGGTGTGTCCCATGCACCAAATTCACTCCCAAATTGATATCTGTTTATCAGAAAATCAAGCAAGAGATAGCTGAAAAAGAAGATAATGAAGAAGGTTTTGAAATTGTGCTTGTTTCTAACGACCGCGACCAAGAATCTTTCGACTCTTACTACAACACCATGCCTTGGTTAGCATTACCTTTTGGTGACCCGGAGATAAAGAACCTTGCAAGACATTTTGATATACAAGGGATACCTTGTTTGGTAATTATAGGTCCTAATGGTAAAACAATAACAATACATGGAAGAAACTTGATAAATTTGTACCAAGAAAATGCTTACCCTTTCACTGCTACAAAAGTGGAGCAGCTAGAGAAACAACTTGAAGAAGAGGCTAAGGATCTTCCAAATTTGGTGCATCATGAGGGGCACCATCATGGACTTAATTTAGTGTCTGATGGAAATGGTGGAGGACCCTTTATTTGTTGTGTTTGTGATGAGCAAGGGTCTAATTGGGCTTATCAGTGTCTTCAATGTGGCTATGAAGTGCATCCAAAGTGTGTCACAACTGTGCATGGATCGTGA 1260 0.3905 MEMKKGVETVVINNGNFVEEEELSSCKFSHLLASKDRDFLLSSTGAQVKVSELEGKVVGLLFAANWYPPCRGFTQLLIGIYQQLKTNIPSFEIVYVSSDEDLDAFNGFYQNMPWLAVPFSDLETKKALNRKYEVEGIPCLVMLQPDDSKGEATLRDGVELIYRYGVQAFPFSKERLEELHDAEREKLENQTLANLLGNNNRDYVFSHTNGLLTQVPVTSLVGKTIGLYFSAGWCVPCTKFTPKLISVYQKIKQEIAEKEDNEEGFEIVLVSNDRDQESFDSYYNTMPWLALPFGDPEIKNLARHFDIQGIPCLVIIGPNGKTITIHGRNLINLYQENAYPFTATKVEQLEKQLEEEAKDLPNLVHHEGHHHGLNLVSDGNGGGPFICCVCDEQGSNWAYQCLQCGYEVHPKCVTTVHGS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0293 419 Pfam C1 domain 368 413 IPR004146 -
Psa5g0293 419 SUPERFAMILY Thioredoxin-like 40 147 IPR036249 -
Psa5g0293 419 SUPERFAMILY Thioredoxin-like 201 326 IPR036249 -
Psa5g0293 419 SUPERFAMILY Cysteine-rich domain 357 414 IPR046349 -
Psa5g0293 419 Coils Coil 346 366 - -
Psa5g0293 419 Pfam Thioredoxin-like 55 146 IPR012336 -
Psa5g0293 419 Pfam Thioredoxin-like 222 321 IPR012336 -
Psa5g0293 419 ProSiteProfiles Thioredoxin domain profile. 181 358 IPR013766 -
Psa5g0293 419 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 368 419 IPR002219 -
Psa5g0293 419 Gene3D Glutaredoxin 204 344 - -
Psa5g0293 419 Gene3D Glutaredoxin 31 173 - -
Psa5g0293 419 PANTHER THIOREDOXIN 20 412 - -
Psa5g0293 419 Coils Coil 173 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0293 Psa-Chr5 20977729 20980452 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0293 K17609 - gmx:100815038 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0293 5 20977729 20980452 Psa5g0293 5 20977729 20980452 ECH