Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0288 ATGGCGAAAGCAAAGTTACGTTCACACGGGAAGAAATTATCGACGGTTACGCTGATTTTCTGGACTCTTTTCATGCTTACACTGGTCATCATCTTCCTCCTTGCGCTCGGAATTGTTTATCTTCCAAATACAAGCGATGATTCTTCAACTACAGATCTCAGTTCCTTCAGACGCAAAGCCTCTGAAAGTTTGGCGGAAAGGAAGGAGCAGTGGACTGAGATTCTTTCTTGGGAGCCGAGAGCTTTTATCTATCACAATTTTCTGTCTAAAGAAGAGTGTGAGTACATGATCAATCTTGCCAAGCCTTTCATGGAAAAATCAAGTGTTGTTGATAGCAAGACCGGAAAGAGTACAGAAAGCAGGGTTCGAACTAGTTCAGGAATGTTTTTGAAGAGAGGAAAGGACAAAACTATCCAGAATATTGAAAAAAGAATTGCGGACTTTACCTTCATACCAGTAGAGAATGGAGAGGGACTTCAGGTTCTTCACTATGGAGTTGGGGAGAAATATGAGCCTCATTATGACTACTTCCTTGATGAGTTCAACACTAAGAATGGGGGCCAACGAGTTGCAACAGTTCTTATGTATCTGTCTGACGTTGAAGAAGGTGGTGAGACCGTATTTCCTGCTGCTAAGGCCAACTTTAGTTCTGTGCCATGGTGGAATGATTTATCTGAATGTGCTAGAAAGGGTCTATCAGTGAAAGCAAAAATGGGTGATGCTCTGCTGTTTTGGAGCATGAGGCCAGATGCCACACTAGACGCATCTAGTTTACACGGCGGTTGCCCGGTAATTAAAGGAAATAAATGGTCTTCAACAAAGTGGATGCATCTTGAGGAGTACAAAGTTTAA 852 0.4249 MAKAKLRSHGKKLSTVTLIFWTLFMLTLVIIFLLALGIVYLPNTSDDSSTTDLSSFRRKASESLAERKEQWTEILSWEPRAFIYHNFLSKEECEYMINLAKPFMEKSSVVDSKTGKSTESRVRTSSGMFLKRGKDKTIQNIEKRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKNGGQRVATVLMYLSDVEEGGETVFPAAKANFSSVPWWNDLSECARKGLSVKAKMGDALLFWSMRPDATLDASSLHGGCPVIKGNKWSSTKWMHLEEYKV* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0288 283 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 6 283 IPR045054 -
Psa5g0288 283 PANTHER PROLYL 4-HYDROXYLASE 3-RELATED 6 283 - -
Psa5g0288 283 Gene3D q2cbj1_9rhob like domain 71 278 - -
Psa5g0288 283 SMART p4hc 79 277 IPR006620 GO:0005506|GO:0016705|GO:0031418
Psa5g0288 283 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 155 278 IPR005123 -
Psa5g0288 283 Pfam 2OG-Fe(II) oxygenase superfamily 159 277 IPR044862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0288 Psa-Chr5 20832946 20837892 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0288 K00472 - gmx:100818586 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0288 5 20832946 20837892 Psa5g0288 5 20832946 20837892 ECH