Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0279 ATGGGCTGTAATTTTTCAAAACTTGATAGACTTCCAGCAGTGTCCTTGTGCCGCGACCGCTCTACATTCATAGATGAATCGCTCCATCAAAGCTATGCTCTTGCAGATGCACACGTGGCACACATGGAATCCCTCCGAGCACTCGGCCCATCACTCGTCAGTTTCTTCCAACAATCCGGAAATTACGGCGAAATCAATGCTTCCATCTCAAAAACATCATCTCCATTGAGTTCACTTTTTTCTTCTGATTCAGACAATGCACAAGTCCTTCTGCATTCTGAATCAGAAATAGATGAAGCACGAAGAGAATCACAGTTATGCACTCACAATTTTAGACATGATTATCATCACCATGACACTTCACAATTCATAGTTTCTGATAACTACGTAAAACCTATTTATGATTCCTATTCTCCACAACCTCCGTCTAATACCAGCACGACCTTTTCTAGTTTCAAGCCACCATCACCGCCTCCTCCTAGTAACTCTGCTTGGGATTTCTTAAACTTTTTTGAACCTTATGAGAAGTATCAAGTACCTTACTACCACGGTGGTGACGGTGACGGTTACGATGACGCTAACTCAATGGTTGAGAAAGAAAAGGGAAATGTTAAAACTCAAAAAAGTGAGTGTTTTAAATCTAAAGGTGGAGGAGATAAAGTGATTATTAAGCCAGAAAATAGAGTAGCGAAACCTAAGGAAACCAATTTGAAAGAGAAGAAAGATTCAGTGGAGTTAGAAGAATGTAACGACTTTCAAAAAGACATTTCTGAAGCGGTGAAAGAGATTCATATTCTATTTGAGAGAGCATCAGATTCGGGGAACACGTTTTTGGAGATGCTAGACGTTGGAAAACTCCGTTACCATTCAAAAACTGAACACAGTACAGTTTCGTGGAAGATTATGCATGTGTTTAGTCAGCCAAATCCAGTGGTGAATAAATGCATGGAGTATGAGGACAAGAGCCTTAGCGATGCGAATCTATGCTCCACTTTGAGTAAGCTGTGTCTTTGGGAGAAGAAGCTGTATCATGAAGTGAAGGCTGAGGAAAAAATGCGCACACTTCATGAGAAGAAGTGTAAGCAGTTGAAATGTATGACTAACAAGAATGCAGATGCTCAAAAAATTGGTTCTGTTGAAGCCTTCATCGATATTTTAGTTATGAAAATGAAAATTTCTTTCCAAACAGTTGACAAGATATCTATTACGATTAGTAAATTGACAGAAGAAGAGCTATGGCCGCAAATCAACAAGTTTATTCTCATGTTTCTCAGAATGTGGAAAGATATGCAAGAATGTTACAAACTTCAGTATCAGAAAATTGTTGAAACCAAAGCTTTAGATGTCTCCACATTCAACGTAAAACCTTGCAATGCTAATATTGAAGCAGCACTGAATCTCAAATCTGAGTTACAGAAATGGATTTTAAGCTTCTTAGATTGGATTCAAGCTCAGAAATCTCTTGTGAGAGCTCTGAATGATTGGTTAGTAAGATGTTTAATGTATGAACCTGAAGAAATACTTGATGGTTCAACTCCTTTTGATGCACCACATGTGTTTGTGATATGTAACAAGTGGTCGAAGGCAATGGATAATATCTCGGAAAAGAATGTTATTGAAGCTGTAAATGGAATCATACTCAGAGTCAATGAACCCTTGGAAAAATACATTTTGGAGCATCAGAAGAATTCAACATTGGACAAGGAATTAGAGAGAAAGGTGAATATTGTGGAGAGACAACAGCACAAGATGCAGAGAAAAGTGAAAATTGTGGAGAAGCAAGAGCAAAAGAAAAAGATGGTTACAATTGGAAAAGCACTTAAAGAAGAGGCCAATGCTATTTTGCAAGGAGATGCTGTGAATAATAATGCTGATATAGTTGATTCTACCGGTTTACAATCAGGTTTGAAGCAGATCTTTGTTGCCATGGAGAAGTTCAGTGCATTAAATGTTAGCTTATATGAAGAACTTTGCAGACAAATTAAGCAAGATGATCATGTTTTAGAAGAATCCAACATAAATCACTAG 2028 0.3792 MGCNFSKLDRLPAVSLCRDRSTFIDESLHQSYALADAHVAHMESLRALGPSLVSFFQQSGNYGEINASISKTSSPLSSLFSSDSDNAQVLLHSESEIDEARRESQLCTHNFRHDYHHHDTSQFIVSDNYVKPIYDSYSPQPPSNTSTTFSSFKPPSPPPPSNSAWDFLNFFEPYEKYQVPYYHGGDGDGYDDANSMVEKEKGNVKTQKSECFKSKGGGDKVIIKPENRVAKPKETNLKEKKDSVELEECNDFQKDISEAVKEIHILFERASDSGNTFLEMLDVGKLRYHSKTEHSTVSWKIMHVFSQPNPVVNKCMEYEDKSLSDANLCSTLSKLCLWEKKLYHEVKAEEKMRTLHEKKCKQLKCMTNKNADAQKIGSVEAFIDILVMKMKISFQTVDKISITISKLTEEELWPQINKFILMFLRMWKDMQECYKLQYQKIVETKALDVSTFNVKPCNANIEAALNLKSELQKWILSFLDWIQAQKSLVRALNDWLVRCLMYEPEEILDGSTPFDAPHVFVICNKWSKAMDNISEKNVIEAVNGIILRVNEPLEKYILEHQKNSTLDKELERKVNIVERQQHKMQRKVKIVEKQEQKKKMVTIGKALKEEANAILQGDAVNNNADIVDSTGLQSGLKQIFVAMEKFSALNVSLYEELCRQIKQDDHVLEESNINH* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0279 675 Coils Coil 567 597 - -
Psa5g0279 675 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Psa5g0279 675 PANTHER UNCHARACTERIZED 1 667 - -
Psa5g0279 675 Pfam Protein of unknown function (DUF632) 257 550 IPR006867 -
Psa5g0279 675 PANTHER F5M15.15 1 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0279 Psa-Chr5 20517359 20520342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0279 1 84 Acyl Lipid Metabolism Gene Families AT2G27090 34.118 4.71e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0279 - - cam:101491047 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0279 5 20517359 20520342 Psa5g0279 5 20517359 20520342 ECH