Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0226 ATGTTTTCTGAAAGATTGGGGGTGGAAGAATCTCGTTTACAAGAAGATTTTCACGGTTTGAGTGTGTCAAAGCGTCTTGTGAGGAGTGTTAGCCAGAAGTTGAGGAAGAAGAATATTAATAGCAGAAGTTTAGGGGAAGATGATGTTGATGATGATGATGTTAATGGAGTTTCTTTAAAGTGTTTGTCGCTTTATGGTCGGGGTGGGGGTTGTAAGGTAGGTGCTGATACTAGTGATGAATTAGGGGATTCGAGTGCGAGAAGGAGATCTAGTTCGAGTGAAGAAGGGAAGGGATATAAACCGGTTTGTGCTTATCAAGATACTGCTGTTGTAGATTGTTTCTCGTATGGGGTGAGGGATAGGTTTTGGAGGAGGCATCATAGAAAGAATTCTGAATTGGATGAGATGGTGACGAACAGTAATAAAATGCATGTTTTTCTTCCGGATGATATTCTTGAAATGTGTTTGATGAGGCTTCCGTTGACAAGTTTGATGAATGCTAGACTTGTTTGCAAAAAATGGAGGTCGTTGACTACTACACCGAGATTCCTTCAAATGAGAAGGGAAGGGTTGTATCAAAATCCATGGTTGTTTATGTTTGGTTCTGTTAAAGATGGATTTTGTTCGGGTGAGATACACGCGTTGGATGTGTCTCAGAATCAATGGCATAGGATCGATGCTGGTTTTCTCAGAGGAAGGTTCTTGTTCTCTGTTGCTAGTGTACAAGATGATATCTTCATTGTTGGAGGATGTTCTAGCTTAACTAACTTTGGGAAAGTGGATAGGAGCTCATTCAAGACGCATAGAGGGGTGCTTTCATTTAGCCCCTTGACGAAATCTTGGCGTAAAATGCCGTCTATGAAATATGCTAGATCAATTCCTATACTTGGAGTCTTTGAAGTCAGTTTGGATTTTTCAAGTTGTCAAGGTCATCAAAGTCGGCAAGACAAGCGTTTTCCAAGATCAAGGATTGGTGGGGTTTCGGACGTCTATGAGGATCCTCATAAGCTTTCAATGAGACGTCATTCAAGATCTACTTTTAACGAGACTGAAGCTTCATCTTTGCATAGTAGAAAGGCACACAAGTTCCTGAGACAGATAAGCGATCTTTCAAGCTCTAAGAGCAGTAGGAGATTTTTGGTCATATCTGTAGGGGGTCTGGGATCTTGGGATGAACCCCTGGACTCGGGAGAAATATATGATTCTGCATCCAATAAGTGGACCGAAATCCCAAGATTGCCTTTTGATTTTGGGGTTGCTTGTTCCGGAGTTGTATGTGGCAACATGTTTTATGTTTATTCTGAAACGGACAAGCTTGCAGCATATGACATAGGACGAGGTTTCTGGATTGCAATTCAAGCCACTCCATTCCCACCTCGTGTCCATGAGTACTACCCCAAAGTAGTATCTTCAAATGGTCGTCTATTCATGCTCTCCGTGTCTTGGTGTGAAGGCGATGGTCAAATTGGGCGCCGAAACAAGGCTGTTAGAAAACTATGGGAGTTAGATCTCATGTATCTTACCTGGACTGAAGTCTCAGTGCATCCTGATGCCCCAATGGACTGGAATGCTGTATTTGTGGCAGACAAAAACTTGATTTTTGGAGTAGAGATGTTCAAAATATTTGGCCAGGTCTTGGATTTTTTCACTGTATGTGATGTGTCTGATATGACAAACTGGAACCATATTTCAAGGAATCATGTCACTCATGAGCTCGATGGTTCATCGTGCGTGACCAAATCCATGGCAGTGCTGCACCTTTGA 1764 0.4218 MFSERLGVEESRLQEDFHGLSVSKRLVRSVSQKLRKKNINSRSLGEDDVDDDDVNGVSLKCLSLYGRGGGCKVGADTSDELGDSSARRRSSSSEEGKGYKPVCAYQDTAVVDCFSYGVRDRFWRRHHRKNSELDEMVTNSNKMHVFLPDDILEMCLMRLPLTSLMNARLVCKKWRSLTTTPRFLQMRREGLYQNPWLFMFGSVKDGFCSGEIHALDVSQNQWHRIDAGFLRGRFLFSVASVQDDIFIVGGCSSLTNFGKVDRSSFKTHRGVLSFSPLTKSWRKMPSMKYARSIPILGVFEVSLDFSSCQGHQSRQDKRFPRSRIGGVSDVYEDPHKLSMRRHSRSTFNETEASSLHSRKAHKFLRQISDLSSSKSSRRFLVISVGGLGSWDEPLDSGEIYDSASNKWTEIPRLPFDFGVACSGVVCGNMFYVYSETDKLAAYDIGRGFWIAIQATPFPPRVHEYYPKVVSSNGRLFMLSVSWCEGDGQIGRRNKAVRKLWELDLMYLTWTEVSVHPDAPMDWNAVFVADKNLIFGVEMFKIFGQVLDFFTVCDVSDMTNWNHISRNHVTHELDGSSCVTKSMAVLHL* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0226 587 SMART kelc_smart 244 301 IPR006652 GO:0005515
Psa5g0226 587 SMART kelc_smart 380 427 IPR006652 GO:0005515
Psa5g0226 587 PANTHER OS09G0555300 PROTEIN 1 587 - -
Psa5g0226 587 SUPERFAMILY F-box domain 146 209 IPR036047 GO:0005515
Psa5g0226 587 Gene3D - 158 300 IPR015915 GO:0005515
Psa5g0226 587 SUPERFAMILY Kelch motif 381 535 IPR015915 GO:0005515
Psa5g0226 587 ProSiteProfiles F-box domain profile. 141 187 IPR001810 GO:0005515
Psa5g0226 587 SUPERFAMILY Kelch motif 194 298 IPR015915 GO:0005515
Psa5g0226 587 PANTHER OS09G0555300 PROTEIN 1 587 - -
Psa5g0226 587 Pfam Kelch motif 384 414 IPR006652 GO:0005515
Psa5g0226 587 Pfam Kelch motif 233 287 IPR006652 GO:0005515
Psa5g0226 587 SMART fbox_2 147 187 IPR001810 GO:0005515
Psa5g0226 587 Gene3D - 343 572 IPR015915 GO:0005515
Psa5g0226 587 Pfam F-box domain 147 183 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0226 - - ccaj:109802378 1001.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0226 5 16037865 16040717 Psa5g0226 5 16037865 16040717 ECH