Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0205 ATGAGGTTGAATCTGTTTCCGTTTCTCTTCGCATTTACCATTCTATCCCTATCCTCGCATGTTCTATCCACCTCCGATCTAATCCTCACCAAGGTTGACCGTCGTATTGATCTATCATCACAAATTGTCCGCACCATTACTTCTCTAAAGGTAGAGAATGCAGGATCTGATACTGTATCAGAAATCTTGTTGGCTTTTCCTGATAGCCATGCAAATTACTTGGCATATTTGAAAGCAGCACTTAAGGAAGGAAAAGGAAAGGCGAAATCCTCTTCTGGTGCTGGTTTACCTTATGAAATTGTCCAGCCGAAAGATGCTCCCGCTTCCTTGAAAATTTATTCAGTAACTTTACCTAAAGGCCTTGCCAAGGGAGAGACTCTGACATTGGATGTCTTGGCGGTTTTTACTCACATTTTGCAACCGTTTCCGGAGAAAATTACTCAGGCCGACATCCAGCTTCTGCTGTTTCAAGAGACTGCGCAGTATCTTTCTCCTTATCCCGTGAAGGCTCAATCACTCACTGTTAAATTACCCGAGGCTAGGATAGAGTCCTACTCAAAATTGGAAAATACAAAACTTCAGGGTTCTGAATTGAAATATGGTCCATATGAGAATCTTCCTCCATATTCGTACTTGCCAATTGTTATCCACTTTGAGAATAATCAGCCGTTTGCCGTTGCTAAAGAGTTGGTACGGGAGATTGAGATTTCCCATTGGGGAAATGTGCAGATCACAGAGCATTATAATCTTGTTCATGGCGGTGCTCAGAGCAAAGGAGAATTCTCTAGGCTTGACTATCAGACCAAACCGTATGTAAAGGGTGCATCAGCCTTTCGGCGTCTTTTTGCTAAGCTGCCACCAAGAGCTCATTCTGTGTACTACAGGGATGAAATAGGCAACATTTCCACTTCTAGTCTGTGGGGTGACTCAAAAAAGACAGAACTGGTGATCGAACCCAGGTATCCAATTTTTGGTGGCTGGAAAACTGCCTTTACTATTGGATATGGGTTGCCACTTCAGGACTTCTTGTTTGGCATCGATGGAAAGCGCTTCCTTAATATTTCGTTTGGTTCCCCCTTTATCGAGTTGGTAATAGACACTCTTGTTGTGAAGGTTGTTTTGCCAGAGGGTTCAAAAGATACTTCAGCATCTGTTCCATTTTCTGTGAAACAAAGGCACGAGACAAAGTTTTCTCACTTGGATATTGCTGGTAGACCTGTTGTTGTGCTGGAGAAAAACAATGTCGTGCCTGAGCATAATGTGCATTTTCAGGTCTATTATAAGTTCAACAGACTCTCTATGCTCAGGGAGCCATTGATGTTGATTTCTGGGTTTTTCTTTCTGTTTGTTGCCTCCATTGTCTACATGCATGCAGACTTGTCAATCTCCAAGACTTCTGCATCTTATTTGGCAAAGCTCCAATGGGAAGAGGTTCAAGCAACTGTTCATCAGATCCATAATATCATTAGCCTTTGCTTAACAACACATGACAAGCTAGAAGCATCCTTGCGTGATCTTTCCAGGTCAGGAGATATTCAAGCGTGTAAAGCAACCCGAAAATCAGTTGATAGCTCGCTGAAAGAGATCACAAAGGAGTTAAAATCACCTGTAGCATTCTTGCAGTCTTCTCCACAAGCCACACCAATATTACCCAAGGTGGAGGAAGTTATTGCCAAGGAGAGAGATTTGCAGGAGAAGCTTATGGCAAAACACTCTACCGTTGTTGACTGTTACGAGAAGAAATTAGGAGGAAGAGAAATTGAGAATCGGATTGCCTCACATCAGCAGAAAATTACAGCTCTGAGGCAAGAGATTGACTATCTTCTGGAGTTGATTGATGAGATATGA 1848 0.4248 MRLNLFPFLFAFTILSLSSHVLSTSDLILTKVDRRIDLSSQIVRTITSLKVENAGSDTVSEILLAFPDSHANYLAYLKAALKEGKGKAKSSSGAGLPYEIVQPKDAPASLKIYSVTLPKGLAKGETLTLDVLAVFTHILQPFPEKITQADIQLLLFQETAQYLSPYPVKAQSLTVKLPEARIESYSKLENTKLQGSELKYGPYENLPPYSYLPIVIHFENNQPFAVAKELVREIEISHWGNVQITEHYNLVHGGAQSKGEFSRLDYQTKPYVKGASAFRRLFAKLPPRAHSVYYRDEIGNISTSSLWGDSKKTELVIEPRYPIFGGWKTAFTIGYGLPLQDFLFGIDGKRFLNISFGSPFIELVIDTLVVKVVLPEGSKDTSASVPFSVKQRHETKFSHLDIAGRPVVVLEKNNVVPEHNVHFQVYYKFNRLSMLREPLMLISGFFFLFVASIVYMHADLSISKTSASYLAKLQWEEVQATVHQIHNIISLCLTTHDKLEASLRDLSRSGDIQACKATRKSVDSSLKEITKELKSPVAFLQSSPQATPILPKVEEVIAKERDLQEKLMAKHSTVVDCYEKKLGGREIENRIASHQQKITALRQEIDYLLELIDEI* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0205 615 PANTHER RIBOPHORIN I 8 593 IPR007676 GO:0006486|GO:0016021
Psa5g0205 615 Coils Coil 584 604 - -
Psa5g0205 615 Pfam Ribophorin I 29 455 IPR007676 GO:0006486|GO:0016021
Psa5g0205 615 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1 8 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0205 Psa-Chr5 14927617 14932243 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0205 25 553 Miscellaneous Gene Families AT1G76400 66.919 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0205 K12666 - gmx:100817203 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0205 5 14927617 14932243 Psa5g0205 5 14927617 14932243 ECH