LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa5g0199	ATGAAAGGTGCGGTTCTTGTTGCAATTGCTGCTTCCATCGGGAATTTTCTTCAGGGTTGGGATAATGCTACCATTGCTGGTTCAATTCTTTACATTAAGAAAGACCTTGCTCTGCAAACAACTATGGAAGGACTTGTGGTGGCCATGTCTCTGATTGGAGCTACTGCCATTACGACTTGCTCTGGTCCTATCTCAGATTGGCTTGGTCGGAGACCAATGTTGATAATCTCATCCGTGCTGTATTTCTTGGGTAGTTTGGTAATGTTATGGTCTCCTAATGTTTATGTGCTGTGCTTAGCAAGGCTGCTTGATGGATTTGGTATTGGCCTTGCCGTAACTCTTGTTCCGGTTTATATATCTGAGACTGCTCCCTCCGATATAAGGGGATCGTTGAATACACTTCCCCAGTTCAGTGGTTCAGGAGGCATGTTTTTATCATATTGTATGGTTTTTGGGATGTCATTGAGTGCCTCCCCTAGCTGGAGAATAATGCTCGGGGTTCTCGCTATTCCTTCTCTCTTCTTTTTTATATTGGCATTATTCTTCTTGCCTGAGTCTCCTCGGTGGCTCGTGAGTAAAGGAAAGATGCTAGAAGCTAAAAAGGTTCTCCAAAGATTGCGCGGCCAGGAAGATGTGTCAGGTGAGATGGCATTGCTGGTTGAAGGTCTTGGGATTGGTGGTGATGCATCTATAGAAGAGTACATAATAGGCCCAGATGACGATGTGGTGGATGGCCATGAACAAACAACAGAGAAAGACAAGATCCGGTTATATGGATCTCAAGCAGGTCTCTCTTGGATAGCAAAACCTGTAGCTAGACAGGGTTCTGTGGGTCTTGTGTCACGCCATGGAAGCCTTGCAATGGATCCTCTTGTGACCTTATTTGGAAGCGTTCATGAGAAGCTTCCCGATTCAGGAAGCATGAGAAGTGCTTTGTTTCCAACTTTTGGAAGCATGTTCAGCACGGCTGAGCCTCATATTAAAAATGAAAATTGGGATGAAGAGAGCCTACAAAGAGAAGGTGAAGACTACATGTCAGATGGTGCTGCCGGGGGCTCCGACGATGATTTGCATAGTCCTTTAATCTCACGTCAAACAACTAGCCTTGAAAAAGACATGCCGCCTCCTCTTTCCCATGACAGTATGCTGAATAGCATGAGGCGCAACAGTAGTCTCATGCAAGGGTCAGGTGAGCCAGTTGGTAGTACCGGGATTGGTGGTGGTTGGCAGCTTGCATGGAAATGGTCCGGTAAAGGTGAGGACGGGAAAAAGCAAGGAGAGTTTAAAAGGATTTATTTGCATGGGGAGGGAGTTTCTGGATCTCGACGTGGATCCATGGTATCAATTTCTGGTGAAGGCGACTTTGTCCAGGCCGCTGCCTTGGTTAGCCAACCCGCACTTTACTCCAAGGAGCTAATGGGCGAACAACCAGTTGGGCCTGCAATGGTTCACCCATCTAAGACTGCTTCAAAAGGGCCCATTTGGAAGGCTCTCCTCGAACCAGGGGTCAAGCATGCATTGTTTGTTGGGATTGGAATTCAACTTCTTCAGCAGTTTTCGGGGATAAATGGAGTTCTATATTACACTCCTCAAATCCTTGAAGAAGCCGGTGTTGCAGTTCTTCTTTCAGATTTGGGTCTTAGCTCAACGTCCTCGTCTTTTCTTATAAGTGCTGTCACAACCTTGTTGATGCTTCCATCTATAGGCCTAGCCATGAGGCTTATGGATGTCACTGGCAGAAGACAGTTACTACTTGTCACAATTCCGGTGCTGATAGTGTCACTCGTTATATTGGTCCTTGGAAGCGTAATAAATTTTGGCAGTGTTGTCCATGCAGCGATCTCAACTGTATGCGTCGTGGTTTACTTTTGCTTCTTTGTTATGGGTTATGGACCAATTCCAAACATCCTTTGCGCAGAGATCTTTCCAACTAGAGTGCGTGGGCTCTGCATTGCTATCTGTGCGCTAGTGTTCTGGATTGGAGACATCATCGTCACATACTCACTGCCTGTGATGCTCAGTTCATTAGGACTGTCCGGTGTGTTTGGCGTTTACGCAGTTGTGTGTTGCATCTCTTGGGTATTTGTGTATCTGAAGGTTCCTGAAACAAAAGGCATGCCCCTTGAAGTCATCTCCGAATTCTTTTCTGTTGGTTCAAAGAAAGCCGAAGCTGCCAAAGATGAGTGA	2187	0.4609	MKGAVLVAIAASIGNFLQGWDNATIAGSILYIKKDLALQTTMEGLVVAMSLIGATAITTCSGPISDWLGRRPMLIISSVLYFLGSLVMLWSPNVYVLCLARLLDGFGIGLAVTLVPVYISETAPSDIRGSLNTLPQFSGSGGMFLSYCMVFGMSLSASPSWRIMLGVLAIPSLFFFILALFFLPESPRWLVSKGKMLEAKKVLQRLRGQEDVSGEMALLVEGLGIGGDASIEEYIIGPDDDVVDGHEQTTEKDKIRLYGSQAGLSWIAKPVARQGSVGLVSRHGSLAMDPLVTLFGSVHEKLPDSGSMRSALFPTFGSMFSTAEPHIKNENWDEESLQREGEDYMSDGAAGGSDDDLHSPLISRQTTSLEKDMPPPLSHDSMLNSMRRNSSLMQGSGEPVGSTGIGGGWQLAWKWSGKGEDGKKQGEFKRIYLHGEGVSGSRRGSMVSISGEGDFVQAAALVSQPALYSKELMGEQPVGPAMVHPSKTASKGPIWKALLEPGVKHALFVGIGIQLLQQFSGINGVLYYTPQILEEAGVAVLLSDLGLSSTSSSFLISAVTTLLMLPSIGLAMRLMDVTGRRQLLLVTIPVLIVSLVILVLGSVINFGSVVHAAISTVCVVVYFCFFVMGYGPIPNILCAEIFPTRVRGLCIAICALVFWIGDIIVTYSLPVMLSSLGLSGVFGVYAVVCCISWVFVYLKVPETKGMPLEVISEFFSVGSKKAEAAKDE*	729

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa5g0199	728	CDD	MFS_GLUT_like	505	702	-	-
	Psa5g0199	728	Gene3D	MFS general substrate transporter like domains	487	727	IPR036259	-
	Psa5g0199	728	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	7	704	IPR020846	GO:0022857
	Psa5g0199	728	ProSitePatterns	Sugar transport proteins signature 2.	103	128	IPR005829	GO:0016021\|GO:0022857\|GO:0055085
	Psa5g0199	728	Gene3D	MFS general substrate transporter like domains	2	256	IPR036259	-
	Psa5g0199	728	PANTHER	-	1	725	-	-
	Psa5g0199	728	Pfam	Sugar (and other) transporter	493	715	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
	Psa5g0199	728	Pfam	Sugar (and other) transporter	7	219	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
	Psa5g0199	728	PRINTS	Sugar transporter signature	15	25	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Psa5g0199	728	PRINTS	Sugar transporter signature	98	117	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Psa5g0199	728	PRINTS	Sugar transporter signature	517	527	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Psa5g0199	728	PRINTS	Sugar transporter signature	616	637	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Psa5g0199	728	PRINTS	Sugar transporter signature	639	651	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Psa5g0199	728	PANTHER	MONOSACCHARIDE-SENSING PROTEIN 1	1	725	-	-
	Psa5g0199	728	ProSitePatterns	Sugar transport proteins signature 1.	61	78	IPR005829	GO:0016021\|GO:0022857\|GO:0055085
	Psa5g0199	728	SUPERFAMILY	MFS general substrate transporter	5	709	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa5g0199	Psa-Chr5	14716464	14721096	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa5g0199	1	728	Organic Solute Cotransporters	AT4G35300	69.137	0.0	968

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa5g0199	-		-	gmx:100791976	1170.99

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa5g0199	5	14716464	14721096	Psa5g0199	5	14716464	14721096	ECH