Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0197 ATGGCATCCATTTCATGGTTCAGCTGTCTTCATATCCGACCAACAGCCTCTGCAGACAACAAAGGTTTATCATCTTCCATAACCGTGGAACATCATAAAACAAGACCACAGAATTTGATCAGTTCTTCCTTAGAAGAAGTACATGCTGTTAATAGAAGACAACTGATTCTTTACACGTCAACAGCAGCCATTGCAGCTTCATCTACTGTCTCAAATGCATTGGCACTCAATGATGTTTCTGAGGAGTTTAGTGTCTACACCGATGATGAGAACAAGTTCAAGATAGAGATTCCTCAAGAGTGGAAAACCGGAACAGGAGAATCTGCTGGATTTAAATCACTAACTGCTTTTTATCCAAAAGAAGAATCTAATTCCAATGTGAGCGTTGTGATCACGGGAGTAGGACCGGATTTCACTAAGATGGAATCGTTTGGCAAAGTTGAAGAATTTGCTGACACTCTGGTTAGTGGTTTAGACAGAAGCTGGAAAAAACCACCTGGTGTGGCTGCTAAACTCATAGACTGTAAATCATCTAAAGGATTTTATTTCATTGAGTATACGCTGCAAAATCCTGGCGAGAGTCGGAAACATCTATACTCAGCTATTGGGATGTTAACAAATGGCTGGTATAACAGACTGTATACAGTAACAGGACAGTATGGAGATGAGGAAACAGACAAGTACGCTTCCAAGATTCAGAAGGCGGTTCGATCGTTTAAGTTCACATAA 729 0.406 MASISWFSCLHIRPTASADNKGLSSSITVEHHKTRPQNLISSSLEEVHAVNRRQLILYTSTAAIAASSTVSNALALNDVSEEFSVYTDDENKFKIEIPQEWKTGTGESAGFKSLTAFYPKEESNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKKPPGVAAKLIDCKSSKGFYFIEYTLQNPGESRKHLYSAIGMLTNGWYNRLYTVTGQYGDEETDKYASKIQKAVRSFKFT* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0197 242 SUPERFAMILY Mog1p/PsbP-like 83 241 IPR016123 -
Psa5g0197 242 Pfam PsbP 82 241 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Psa5g0197 242 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 73 241 - -
Psa5g0197 242 PANTHER - 31 242 - -
Psa5g0197 242 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTIC 31 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0197 Psa-Chr5 14381706 14384027 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0197 - - lja:Lj1g3v3404330.1 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0197 5 14381706 14384027 Psa5g0197 5 14381706 14384027 ECH