Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0126 ATGGGTGCTGCTTGTTTTGTTGCTGCTAAAGATAAGACTGTACAGAGTGGATCGACTAATGAGAATTCACATCGGAATATTCGGTGTTCGCCGACGTGGAGCTTTCGTTGGGATCATCGAGGAGGGCGTGTAGCTGGTGAAGATACTTCTATAAACTGGTTTTCTGATGGGAATAGCAGGAATGATGGATCGGAGAGTAAAAATGAATCGGGGCGTGTATTAGAGGAGGGAAGTCCGTTGCAGAACTGTCAACAGAATGCATGCCGAAAATCGCCGATTTCTGAAGGGACTGGTGCAAATGTTAGAGATTTAACTTCAGATGTATCTATTTCAAGGTCTGTGTCTATTGATGCGAGCATGGAACAGGCAAATGGGTTGGGAGAATCATCATTAGCGTCTTGGCCATCACCATCACCTGCAAAACCATCATTGCATTCAACTTCATTGTCAGCATCTCCTTTATCATCCCAATACCACATGCTTCCACCTAGCTTTACCCCATCAAGGTGGCCTGGCCATTCCCCGGGACACCAGCTGTTATGGCCAACTTCTGATATTCGAATGCAAGCATGTAAGTCGCCCGGCAGCTTCTCTCTGTCTGAGGAAAGACCCGTGTTTCCTTCATGGAGCAACGGATCGGGAATGCGCTCCCGTGGGGGATCTTCAGATGGTTGGTCTATACCTGGCTTTTCAGAGCTGATGGGAACTCACCACAGACAAAGGTGGTCATTGGATAGCGAGTCCTTTGGTTCTAATTATGAAAGGATAGCTAGATCTGGCAGTTGGTTTTCAGCCTCGCCTGTTGATTTAAGAACATGTGGGTTTTGCTCAAAGGTTTTAAAGGAGAAGTCTCCTTGGAGTACCCAAAAGATATACACAAGTAATGACCTTTCTGTAGTTGCCATTCTTATCTGTGGACACGTCTATCATGCTGAATGTTTGGAGAATATGACAGCTGATATTAGTAAGTACGATCCAGCTTGCCCAGTCTGCAGCTTTGGTGAGAAACAAACTATGGAGTTGTCCAAAAAAGTTCTGAAAGCTGAAATAGATTTGAAGGCTAGAAACCAGACATTGGAGAATCAGGTTGAGTACAGTGATATTGAAAACGATGATTCTGTTGCGTTTGATAGCATTAAAGTGAAAGAACCTATAGGTAAAGGTAAAGGTCCTCGGATGGACTCCAGTTCTCGTGGGAGAAGCTCATTCGGGAAACCTTTTTTGAGACGACACTTTACATTTGGATCAAAAGGTTCCAGATCCACGATAGATAGTCACCCTACAAAAAAGAAGGGCTTCTTTTGGACAAAATCAAGCAAAGAATAA 1326 0.4427 MGAACFVAAKDKTVQSGSTNENSHRNIRCSPTWSFRWDHRGGRVAGEDTSINWFSDGNSRNDGSESKNESGRVLEEGSPLQNCQQNACRKSPISEGTGANVRDLTSDVSISRSVSIDASMEQANGLGESSLASWPSPSPAKPSLHSTSLSASPLSSQYHMLPPSFTPSRWPGHSPGHQLLWPTSDIRMQACKSPGSFSLSEERPVFPSWSNGSGMRSRGGSSDGWSIPGFSELMGTHHRQRWSLDSESFGSNYERIARSGSWFSASPVDLRTCGFCSKVLKEKSPWSTQKIYTSNDLSVVAILICGHVYHAECLENMTADISKYDPACPVCSFGEKQTMELSKKVLKAEIDLKARNQTLENQVEYSDIENDDSVAFDSIKVKEPIGKGKGPRMDSSSRGRSSFGKPFLRRHFTFGSKGSRSTIDSHPTKKKGFFWTKSSKE* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0126 441 MobiDBLite consensus disorder prediction 54 91 - -
Psa5g0126 441 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 261 333 IPR013083 -
Psa5g0126 441 PANTHER EXPRESSED PROTEIN 1 435 - -
Psa5g0126 441 ProSiteProfiles Zinc finger RING-type profile. 273 332 IPR001841 -
Psa5g0126 441 MobiDBLite consensus disorder prediction 75 91 - -
Psa5g0126 441 MobiDBLite consensus disorder prediction 127 149 - -
Psa5g0126 441 SUPERFAMILY RING/U-box 272 333 - -
Psa5g0126 441 PANTHER BNAA09G43140D PROTEIN 1 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0126 Psa-Chr5 7531977 7537353 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0126 - - mtr:MTR_3g117180 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0126 5 7531977 7537353 Psa5g0126 5 7531977 7537353 ECH