Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0054 ATGCACGCTTCATCCTTTTCAATCTTTCTCAATTCTCACTTTTCATTCTTGTTGATAATAGTAATAACAATTATCCTAATTCCTATGGATGTGATGTCTGCTAACAGTAGTAACTGTGGAAATGCTTCAAATCCTTACCATCAATGCACACAAGCTTGTTTTCAAAAAACAAAGGGAAACAACAAAGCACAGTCTAATAGAAAAACCAGTTCAAGTTATGGGCGAAGTTTTACAGATGGTGATTTGGGCAAAAAGGTAATTAATGGAGAAAGACGAACTTATCCTGGTTGTCCTAAAGCTTCTAATCCTTATCATACCTGTGATGCCAATTGCAACAAATCATCATCCAATTCAGGTGCTACTCCTCATTCCAAGATTGATCCTAGGAAGAAGATAGGTTCTAAGCCAGAACCCCCTATTCTTCCAAGGAAAAATGGGACAATCAATAATAATCTCTCCAATGTTTCATCAACAAAACCACATCACTCTGAGAACATAAAGATAGAGTCAAAAGAGGATGAGATCATTCCTTCTTCTGGACCAATTTCTGCTCAATTACACATTCCACATGTTATGCCTAAAGAACAAGTTAAGGATAGTGTTACTGAGGACAAAGTTGCTGCTTCTGATGAAATTGTTCCAATTACTACTTATTCTGTTGAAACTGGTTCGAAAGATTTTAGTTTCTCTGACACTCCCGTTCCTCGCAACAACGACAAAGAAGTAGATACGAGTAGTGACGGAGAGACGGATAGTGTGATATCTGAATCGCGTATTCAAATCGGAAAATACCATGTCAAAGAAAGTTTTGGTTCCATTCTACAAACAATACTTGATAAGTATGGTGATATAGGCGCAAGCTGTGATTTAGAATCCGTCGTTATGCGTTCGTATTACATGGAATGTGTATGTTTTGTGGTACGAGAATTACAATCTTCTTCTGATTCATTAACTAAGTCCAAAGTGAATGAATTGTTGGACATTGTCAAGGATATTGAATCTGCTCATCTTCGCGTCGCATGGTTGCGTAACACGCTAGATGAAATTGCTGAAAATGTTGAACTTATTAGACAACATCAGGATATGGAGATCGAAAAGGCTAATTATGATCGCGAAATGGAATCGTTGAGAGAAAAACTGGAATCGGAGTTGGTAACATTGGCTCAGAAAGAACAAGAGGTTGCTGATATTCATATGAGGATTCCTGAAATTAGAGATCGTTTGAGAAATCTTGAGCAGCTCATGTCTTCTGGATCAGAAAATGAGCAAACCATGTTGCCTATCAAGTCCAAGATTGATCAATTATTATAA 1311 0.373 MHASSFSIFLNSHFSFLLIIVITIILIPMDVMSANSSNCGNASNPYHQCTQACFQKTKGNNKAQSNRKTSSSYGRSFTDGDLGKKVINGERRTYPGCPKASNPYHTCDANCNKSSSNSGATPHSKIDPRKKIGSKPEPPILPRKNGTINNNLSNVSSTKPHHSENIKIESKEDEIIPSSGPISAQLHIPHVMPKEQVKDSVTEDKVAASDEIVPITTYSVETGSKDFSFSDTPVPRNNDKEVDTSSDGETDSVISESRIQIGKYHVKESFGSILQTILDKYGDIGASCDLESVVMRSYYMECVCFVVRELQSSSDSLTKSKVNELLDIVKDIESAHLRVAWLRNTLDEIAENVELIRQHQDMEIEKANYDREMESLREKLESELVTLAQKEQEVADIHMRIPEIRDRLRNLEQLMSSGSENEQTMLPIKSKIDQLL* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0054 436 MobiDBLite consensus disorder prediction 144 161 - -
Psa5g0054 436 PANTHER OS06G0711100 PROTEIN 34 233 - -
Psa5g0054 436 PANTHER OS06G0711100 PROTEIN 220 435 - -
Psa5g0054 436 MobiDBLite consensus disorder prediction 114 165 - -
Psa5g0054 436 MobiDBLite consensus disorder prediction 226 253 - -
Psa5g0054 436 Pfam Arabidopsis phospholipase-like protein (PEARLI 4) 227 434 IPR007942 -
Psa5g0054 436 Coils Coil 352 393 - -
Psa5g0054 436 PANTHER BNAA07G03350D PROTEIN 220 435 - -
Psa5g0054 436 PANTHER BNAA07G03350D PROTEIN 34 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0054 Psa-Chr5 2654496 2656752 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0054 - - mtr:MTR_3g118020 524.242