Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0048 ATGGAGTTGGCGCAACTGGAAGCATTGTGCGAGAGGCTTTACAATTCTCAGGACTCAGTTGAACGGGCTCATGCGGAGAATACACTGAAATGCTTCTCTATGAACACTGAATACATTTCTCAATGTCAATATATTCTTGATCATGCTTTGACACCTTATGCATTGATGCTTGCTAGTTCTAGTTTGTTGAAACAAGTCACCGAACATAGCCTTGATTTGAAGCTCCGTCTCGATATATGGACCTATCTGATCAACTATCTAGGGACCAGAGGACCTGAGTTACAGCCGTTTGTGACTGCTTCTCTGATCCAACTTTTGTGCCGAGTAACGAAATTTGGATGGTTTGATGATGACAGATTTCGGGACTTGGTCAAAGAATCAATGAACTTCTTGAGTCAGGCAACGCCGGGTCATTATGCCATTGGTTTGAAGATATTGAATCAGCTTATTTCTGAGATGAATCAGGCTAATGCTGGTTTACCTGCAACAAAGCATCGAAGGGTAGCTTGCTCCTTCAGGGATCAATCTCTTTTTCAAATATTTCAGATATCTCTAACATCATTGAGTCAGTTGAAGAATGATGCAATCAGTCAATTGCAAGAATTGGCACTTTCTCTCTCTTTGAAATGTTTATCATTTGATTTTGTGGGGACATCTGTAGATGAAAGTTCAGATGAGTTTGGCACAGTTCAGATTCCATCTCCCTGGAAACCAGTTTTAGAGGATTCTTCAACGTTACAACTATTTTTTGATCACTATGCCATTACAAAGCCTCCTCTTTCGAAGGAGGCACTGGAGTGCTTAGTGCGACTAGCGTCTGTAAGACGTTCTTTGTTTACAAATGATGCTACCCGTTCCAAGTTTTTGGCCCATTTAATGACAGGAACCAAAGTAATCCTGCAAACAGGGCAAGGTCTTGCAGATCATAATAATTACCACGAGTTTTGCCGTCTTCTTGGTCGGTTCAGAGTGAATTACCAGTTGTCAGAGCTAGTTAATGTGGAAGGTTATAGCGATTGGATCCGTTTGGTTGCAGAGTTCACTCTTAAATCTTTGCAGTCATGGCAGTGGGCTAGCAACAGTGTCTACTACCTGTTAGGGTTGTGGTCCAGATTGGTGGCTTCTGTTCCATATTTGAAGGGTGATGCACCAAGCTTACTCGGTGAATATGTTCCTAAGATTACTGAAAGTTTCATCACTTCAAGATTCAATTCTGTGCAGGCTGGATTACCAGATGATCTCGAGAACCCCTTAGACAATGCTGAACTTCTTCAGGATCAATTAGATTGCCTTCCAAATTTATGCAGATTTCAGTATGAAAGCAGTAGCTTATTTATAATAAACATAACGGAGCCTGTCCTGCAAATATACACGGAAAGGGCAAGATTACAAATTAGTGATAGCAATGACCTCTCTGTGATTGAAGACAAACTTGCATGGATTGTTCATATTGCTGCAGCAATTCTCAAGACAAAACAATGCAATGGTTGTAGTGTGGAATCTCAGGAAGTGCTAGATGCTGAAATTTCTGCCCGAGTTCTGCAGTTGATCAATGTAACTGACAGTGGAGTGCACAGTCAGAGATATGGTGAAATAAGCAAACAAAGACTTGATAGGGCAATCCTTATCTTTTTTCAGCATTTCCGGAAGTCATATATAGGAGATCAGGCAATTCTTTCTTCCAAGCAGTTATATGCCCGGCTATCAGAGCTTCTTGGCCTACATGATCATCTATTACTGTTGAATATGATTGTTGGCAAGATAGCAACTAACCTAAAGTGTTACATTGAGAGTGAAGAGGTCATTGATCATACCTTAAGTTTGTTCTTGGAGCTTGCAACTGGCTTCATGACTGGGAAGCTACTTATGAAGTTGGATACAGTGAAGTTTATCATTGCCAATCATACGAGGGAACATTTTCCATTTTTGGATGCAAAGAAGTGCTCCCGCAGCAGGACGATTTTCTATTACACTATTGGCTGGTTGATATTTATGGAGGATTGTCCTGGGAAATTTAAATCTTCAATGGATCCACTCCAGCAGGTTTTCCTCAGTTTGGAATCAACTCCCGATTCAGTGTTTCGAACAGATGCTGTAAAATATGCACTTGTTGGTTTGATGAGAGACCTTAGAGGAATTGCAATGTCCACAAATAGCCGCCGAACTTATGGCTTTCTATTTGACTGGTTGTATCCCGCACACATGCCTCTAATCTTAAAAGGAATCTCACATTGGACAGACACCCCAGAGGTTACGACCCCATTGTTGAAGTTCATGGCTGAGTTTGTGCTAAATAAATCTCAACGTTTGACATTTGACTCTTCTTCTCCCAATGGAATACTTCTCTTCAGGGAAGTCAGCAAATTGATTGTCGCCTATGGATCTAGAATTTTGACTTTTCCAAATGCTGCTGATGTATACACGTACAAGTACAAAGGAATATGGATATGTTTAACAATACTCTCAAGAGCCCTTTCAGGAAACTATGTCAACTTCGGTGTGTTTGAGTTATACGGTGACAGAGCTCTATCCGATGCACTTGACGCTGCTCTAAAGATGACACTATCGATTCCTATGTCCGATATATTGGCTTATCGAAAGCTAACAAAGGCTTATTTTGCATTCTTGGAGGTTTTGTTCTACAGCCACCTCACTTTCATCTTGAGCTTGGACACAAACACCTTTGTGCATTTAGTTGGCTCCCTCGAATCTGGTCTAAAAGGCTTGGATACAAGTATATCATCACAGTGTGCATCTGCTGTTGATAATTTGGTTGCTTTCTATTTTAATAACATCAAAATGGGAGAGGCTCCAAATTTACCTGCATCGGTAAATCTTGCTCGTCATATTGCGGAGTGTCCCACTCTCTTCCCAGAAATTTTGAAGACTCTGTTTGAGATCTTATTGTTTGAAGACTGTAGCAACCAATGGAGTCTGAGCAGGCCAATGTTAAGCTTGATACTCATTAATGAGAAGACATTCTCTGATTTGAAAGCTCAAATCTTGTCATCACAGCCAATGAATCACCAAAAGCGGCTCTCTCTATGTTTTGATAAACTTATGGCAGACGTAACTGAAAAACTAGACTCAAAAAACAGGGATAGGTTTACTCAAAACCTCACCATATTTCGGCATGACTTCCGTGCCAAATAA 3153 0.4072 MELAQLEALCERLYNSQDSVERAHAENTLKCFSMNTEYISQCQYILDHALTPYALMLASSSLLKQVTEHSLDLKLRLDIWTYLINYLGTRGPELQPFVTASLIQLLCRVTKFGWFDDDRFRDLVKESMNFLSQATPGHYAIGLKILNQLISEMNQANAGLPATKHRRVACSFRDQSLFQIFQISLTSLSQLKNDAISQLQELALSLSLKCLSFDFVGTSVDESSDEFGTVQIPSPWKPVLEDSSTLQLFFDHYAITKPPLSKEALECLVRLASVRRSLFTNDATRSKFLAHLMTGTKVILQTGQGLADHNNYHEFCRLLGRFRVNYQLSELVNVEGYSDWIRLVAEFTLKSLQSWQWASNSVYYLLGLWSRLVASVPYLKGDAPSLLGEYVPKITESFITSRFNSVQAGLPDDLENPLDNAELLQDQLDCLPNLCRFQYESSSLFIINITEPVLQIYTERARLQISDSNDLSVIEDKLAWIVHIAAAILKTKQCNGCSVESQEVLDAEISARVLQLINVTDSGVHSQRYGEISKQRLDRAILIFFQHFRKSYIGDQAILSSKQLYARLSELLGLHDHLLLLNMIVGKIATNLKCYIESEEVIDHTLSLFLELATGFMTGKLLMKLDTVKFIIANHTREHFPFLDAKKCSRSRTIFYYTIGWLIFMEDCPGKFKSSMDPLQQVFLSLESTPDSVFRTDAVKYALVGLMRDLRGIAMSTNSRRTYGFLFDWLYPAHMPLILKGISHWTDTPEVTTPLLKFMAEFVLNKSQRLTFDSSSPNGILLFREVSKLIVAYGSRILTFPNAADVYTYKYKGIWICLTILSRALSGNYVNFGVFELYGDRALSDALDAALKMTLSIPMSDILAYRKLTKAYFAFLEVLFYSHLTFILSLDTNTFVHLVGSLESGLKGLDTSISSQCASAVDNLVAFYFNNIKMGEAPNLPASVNLARHIAECPTLFPEILKTLFEILLFEDCSNQWSLSRPMLSLILINEKTFSDLKAQILSSQPMNHQKRLSLCFDKLMADVTEKLDSKNRDRFTQNLTIFRHDFRAK* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0048 1050 Gene3D - 832 1049 IPR011989 -
Psa5g0048 1050 SUPERFAMILY ARM repeat 1 979 IPR016024 -
Psa5g0048 1050 Coils Coil 3 23 - -
Psa5g0048 1050 Gene3D - 1 518 IPR011989 -
Psa5g0048 1050 PANTHER EXPORTIN 4,7-RELATED 3 1050 IPR044189 GO:0005049|GO:0051169
Psa5g0048 1050 PANTHER BNAA10G30440D PROTEIN 3 1050 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0048 Psa-Chr5 2180039 2208969 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0048 K18460 - gmx:100804346 1895.94