Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0046 ATGGAGGATGCAACCGACTCGTCATCATCATCATCACGCGAGAAGGAGAAAGATCATGGAACACTCCCCAATTCGACGACGCGCCAATCTTTAAAATCCGATTCTCAATTCAACAATTACCAAATCTGGAAACAAAAGTTGAGAGAGAATTGCTTCAAACGAGTGCGACAAGACAGAACCCGTTTACTCTGGAAATGTAGGTTCTCCTCCTCGCCATCACAAAACCTTCATCAGGATCAGTTGGACATTGAATTCCAGGACATTGTATCCGATGAATTCCATAAAATTATCAAACACGATAATGACGATGAGGATGATGATCTGTTGTGGGACGATCGAAGTACTCATACCACATACCAAGGTGATGATTGCCAAGAGATACTGCTTGAAATGCAAAGAATATTTTATGAAGACCTCAAATCTCAACAAGAAACCGCAGTTGATACTTGGGAAGATGAAGTCGATGACTACTTGGCTCGTGCTGTTTATGAGCATATGCATCTAAATGCAGATGATACATGTAGAAAAGAGATTTGGTGCCCTGTTTGTAAGCACGGAGAGCTTAAAGACACTCACAATATCATATACTGCACTCGTTGTAAACTTCAACTAACCAAAGCCGACGAGCTTACTTTGGAGTTTTTGCGAGACCGGCTTGCCGAAGTCCATATGGAGCATCTTGACAGAGGTTGCAAATTAAAGCCCAGATTTTGTATAAAGACAAAATTTAATTTAACTGCGTTATATATTATGTGTGAAGGTTGTGAAACATTTGAGATTGTAATTTAA 789 0.4005 MEDATDSSSSSSREKEKDHGTLPNSTTRQSLKSDSQFNNYQIWKQKLRENCFKRVRQDRTRLLWKCRFSSSPSQNLHQDQLDIEFQDIVSDEFHKIIKHDNDDEDDDLLWDDRSTHTTYQGDDCQEILLEMQRIFYEDLKSQQETAVDTWEDEVDDYLARAVYEHMHLNADDTCRKEIWCPVCKHGELKDTHNIIYCTRCKLQLTKADELTLEFLRDRLAEVHMEHLDRGCKLKPRFCIKTKFNLTALYIMCEGCETFEIVI* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0046 262 Pfam Replication protein A interacting N-terminal 39 68 IPR028158 -
Psa5g0046 262 Pfam Replication protein A interacting middle 85 162 IPR028155 -
Psa5g0046 262 MobiDBLite consensus disorder prediction 1 22 - -
Psa5g0046 262 PANTHER RPA-INTERACTING PROTEIN RPAIN 23 262 IPR028156 -
Psa5g0046 262 MobiDBLite consensus disorder prediction 1 33 - -
Psa5g0046 262 Pfam Replication protein A interacting C-terminal 179 259 IPR028159 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0046 - - var:108331854 313.923