Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0012 ATGAAGTCTCTTGTTCAAGATCTTGAAAGAAAAGAAGTAAGAAGACTGATCGATAAAGTGCAGGTTCCAGTGGCAGCTGTTGTGATCATGGCATGTAATCGTGCTGATTACCTGGAGAGGACCATCAATTCTGTATTGAAATACCAAAGGGCCATTTCGTCAAGATTTCCTTTATTTGTATCTCAGGATGGATCAAATTCAAACGTCAAAAATAAGGCTTTGAGCTATGATGAGCTATCTTATATGCAGCACTTAGATTTTGAGTCGGTTCAAACTGAAAGGCCAGGAGAGTTAATTGCGTACTACAAGATTTCACGTCATTACAAGTGGGCTCTAGGTCAACTGTTCTACAAGCATAACTTCAGCCGAGTTATCATTCTTGAAGATGACATGGAAATAGCACCTGATTTCTTTGATTACTTTGAAGCTATGGCAACTCTCCTTGACAAGGATAAGTCCATTATGGCTGTTTCGTCATGGAATGACAATGGACAGAAGCAGTTTGTACATGATCCATACGAACTTTATCGCTCAGACTTCTTTCCTGGACTAGGATGGATGCTGGCTAGATCTACATGGGATGAACTATCACCAAAATGGCCAAAGGCCTACTGGGACGATTGGTTGAGATTAAAAGAGAATCACAAAGGACGACAATTTATCAGACCTGAAGTATGCAGAACATATAATTTTGGGGAACATGGTTCTAGTCTGGGACAGTTTTTTAAGCAATATCTTGAGCCAATCAGGCTGAACGAGGTCCAGGTCGACTGGAAATCAATGGACTTGAGCTATTTGTTGGAGGACAAATATAATATACACTTGGCCAACAATATCAAAAAAGCTAAACCTGTCTCTGGAGCAGACATCGTTCAAAAGACACACAATATAGATGGTGATGTGCGTATTAAGTATAATGATCAGTGGGACTTTGAAAACATTGCTCAGCAATTCGGTGTATTTCAAGAGTGGAAGGATGGTGTGCCTAGAACAGCTTATAAAGGAGTAGTGGTTTTCAGATATCAAACGACGAGGCGTGTATTTCTTATTGGTCCAGAATCTTTGAAGCTACTTGAGATTGAATATTTAGATTCTTAA 1098 0.3962 MKSLVQDLERKEVRRLIDKVQVPVAAVVIMACNRADYLERTINSVLKYQRAISSRFPLFVSQDGSNSNVKNKALSYDELSYMQHLDFESVQTERPGELIAYYKISRHYKWALGQLFYKHNFSRVIILEDDMEIAPDFFDYFEAMATLLDKDKSIMAVSSWNDNGQKQFVHDPYELYRSDFFPGLGWMLARSTWDELSPKWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNFGEHGSSLGQFFKQYLEPIRLNEVQVDWKSMDLSYLLEDKYNIHLANNIKKAKPVSGADIVQKTHNIDGDVRIKYNDQWDFENIAQQFGVFQEWKDGVPRTAYKGVVVFRYQTTRRVFLIGPESLKLLEIEYLDS* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0012 365 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 360 IPR029044 -
Psa5g0012 365 CDD GT13_GLCNAC-TI 24 354 - -
Psa5g0012 365 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Psa5g0012 365 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 23 246 IPR029044 -
Psa5g0012 365 PANTHER PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE 2 360 - -
Psa5g0012 365 PANTHER ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE-RELATED 2 360 - -
Psa5g0012 365 Gene3D - 283 362 - -
Psa5g0012 365 Pfam GNT-I family 2 361 IPR004139 GO:0006486|GO:0008375
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0012 1 360 Glycosyltransferase AT4G38240 70.556 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0012 K00726 - gmx:100795005 678.322