Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0011 ATGAGTGGAGCTGTTGTTGTTGCTATTGCCGCTGCTATCGGTAATTTACTTCAAGGATGGGATAATGCTACTATTGCAGGATCTATTTTATACATAAAGAAAGAATTTCAATTAGAAAGTGAACCCACCGTGGAAGGTCTAATTGTTGCCATGTCACTTATTGGAGCCACCGTCGTCACTACATGCTCCGGAGCCCTATCCGACTTGCTTGGACGACGTCCCATGTTGATCATCTCCTCCCTCTTTTATTTTCTCAGTTCTCTCGTCATGTTTTGGTCTCCAAATGTTTATATACTCCTCTTTGCAAGACTTTTAGACGGTCTCGGTATTGGTCTCGCTGTTACCTTGGTACCTCTTTATATATCTGAGATTGCTCCTCCTGAGATTAGGGGATTACTCAATACACTTCCACAGTTCACTGGTTCTGCTGGTATGTTTTTCTCCTACTGTATGGTCTTTGGGATGTCACTCACCAACTCTCCTAGCTGGAGACTCATGTTGGGTGTTCTTTCAATCCCCTCTCTTTTTTATTTTGCACTCACCATCTTCTTGTTGCCCGAGTCTCCAAGATGGCTGGTCAGTAAAGGACGGATGCTCGAGGCTAAAAAAGTTTTGCAAGCCCTTCGCGGATGCGAAGATGTTGCCGGTGAGATGGCTTTACTGGTCGAGGGTCTTGGAAACGGGGGTGATACATCCATAGAAGAGTACACCATTGCTCCTGCTGATGAATTAGCCGAGGAAGACGATCCATCCAAGGCGAAAGATCATATCAAGTTGTATGGGGCCGAACAGGGTCAGTCCTGGATTGCCAGACCCGTCACTGGACAGAGTTCCCTTGCCCGTATATCTAGGATGGGAAGCATGGCAAATCCAAGTGGTCTGGTGGACCCTCTCGTCACCCTATTTGGTAGTGTCCATGAGAAGTTCCCGGAAAATGGAAGAATGGGGAGCGCTCTTTTTCCACACTTTGGAAGCATGTTCAGTGTTGGGGGAAATCACCCTAGGAATGAAGATTGGGATGAAGAAAGCCTTGCTAGAGAGGGTGATGACTATATATCGGATGCTGCTGCCGGTGATTCTGATGACAATTTGCATAGTCCTTTGATCTCACGTCAAGCGACTAGTATGGATAAGGACCTGCCTCAGCAGGCACATGGTAGCCTTTCAAACGTCAGGCAAGGCAGTCTTTTACAAGTCAATACCGGAGAGCCTGTTGGGAGTGCTGGAATAGGTGGTGGTTGGCAGTTAGCTTGGAAATGGTCTGAACAAGAAGGCCCGGATGGAAAGAAGGAAGGCGGTTTCAAGAGAATATATTTACACCAAGAGGGTGGTCCTGGATCTAGACGCGGCTCTGTGATTTCATTTCTCGGTGGTGATGTGCCAACAGATGGTGAGGCTGTACAGACTGCTGCTCTTGTGAGCAAACCAGCTCTTTATAACAAGGACCTCATGCATCAGAAGCCAGTTGGACCTGCTATGATTCATCCATCTGAAACAGCTGCAAAAGGGCCAAGTTGGAATGATCTTTTTGAACCGGGGGTCAAACATGCATTGTTTGTAGGGGTGGGACTTCAAATTCTTCAGCAGTTCTCTGGTATAAATGGAGTCCTCTACTATACACCACAAATTCTTGAGCAGGCAGGTGTTGGTTTTCTTCTTTCAAACCTGGGCCTTAGTTCTGCTTCATCATCTTTTCTAATTAGTGCAGTGACAACCTTGCTGATGCTTCCTTGTATAGCTATTGCCATGAGGCTCATGGATATTTCTGGCAGAAGGACTTTGCTGCTCACTACAATCCCCATCTTGATAGTAGCTCTTCTGATATTAGTCCTAGGGAGTCTTGTGGATTTGGGCAGCACTGCAAATGCATCAATCTCAACCGCCAGTGTTGTTATTTATTTCTGTTTCTTTGTCATGGGATTTGGGCCAGTTCCAAATATACTTTGTGCTGAGATCTTCCCAACTCGAGTTCGCGGTCTCTGCATTGCCATATGTGCTCTTACCTTTTGGATATGTGACATCATTGTCACCTATTCACTCCCAGTTATGCTGAATTCTGTAGGCCTTGGTGGCGTGTTTGGTCTGTATGCAGCCGTGTGCTTCATAGCTTGGGTGTTTGTCTTCTTGAAAGTTCCAGAAACCAAAGGCATGCCACTGGAAGTGATCATTGAGTTCTTCTCCGTCGGAGCAAAACAGGTTGAGGCAGCCAATCATAATTGA 2220 0.4622 MSGAVVVAIAAAIGNLLQGWDNATIAGSILYIKKEFQLESEPTVEGLIVAMSLIGATVVTTCSGALSDLLGRRPMLIISSLFYFLSSLVMFWSPNVYILLFARLLDGLGIGLAVTLVPLYISEIAPPEIRGLLNTLPQFTGSAGMFFSYCMVFGMSLTNSPSWRLMLGVLSIPSLFYFALTIFLLPESPRWLVSKGRMLEAKKVLQALRGCEDVAGEMALLVEGLGNGGDTSIEEYTIAPADELAEEDDPSKAKDHIKLYGAEQGQSWIARPVTGQSSLARISRMGSMANPSGLVDPLVTLFGSVHEKFPENGRMGSALFPHFGSMFSVGGNHPRNEDWDEESLAREGDDYISDAAAGDSDDNLHSPLISRQATSMDKDLPQQAHGSLSNVRQGSLLQVNTGEPVGSAGIGGGWQLAWKWSEQEGPDGKKEGGFKRIYLHQEGGPGSRRGSVISFLGGDVPTDGEAVQTAALVSKPALYNKDLMHQKPVGPAMIHPSETAAKGPSWNDLFEPGVKHALFVGVGLQILQQFSGINGVLYYTPQILEQAGVGFLLSNLGLSSASSSFLISAVTTLLMLPCIAIAMRLMDISGRRTLLLTTIPILIVALLILVLGSLVDLGSTANASISTASVVIYFCFFVMGFGPVPNILCAEIFPTRVRGLCIAICALTFWICDIIVTYSLPVMLNSVGLGGVFGLYAAVCFIAWVFVFLKVPETKGMPLEVIIEFFSVGAKQVEAANHN* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0011 739 Pfam Sugar (and other) transporter 502 723 IPR005828 GO:0016021|GO:0022857|GO:0055085
Psa5g0011 739 Pfam Sugar (and other) transporter 7 224 IPR005828 GO:0016021|GO:0022857|GO:0055085
Psa5g0011 739 PANTHER - 1 736 - -
Psa5g0011 739 Gene3D MFS general substrate transporter like domains 3 257 IPR036259 -
Psa5g0011 739 ProSitePatterns Sugar transport proteins signature 1. 63 80 IPR005829 GO:0016021|GO:0022857|GO:0055085
Psa5g0011 739 SUPERFAMILY MFS general substrate transporter 8 720 IPR036259 -
Psa5g0011 739 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 715 IPR020846 GO:0022857
Psa5g0011 739 PANTHER MONOSACCHARIDE-SENSING PROTEIN 1 1 736 - -
Psa5g0011 739 Gene3D MFS general substrate transporter like domains 499 737 IPR036259 -
Psa5g0011 739 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa5g0011 739 PRINTS Sugar transporter signature 100 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa5g0011 739 PRINTS Sugar transporter signature 528 538 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa5g0011 739 PRINTS Sugar transporter signature 627 648 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa5g0011 739 PRINTS Sugar transporter signature 650 662 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa5g0011 739 CDD MFS_GLUT_like 14 193 - -
Psa5g0011 739 ProSitePatterns Sugar transport proteins signature 2. 105 130 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0011 Psa-Chr5 910240 917224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0011 1 739 Organic Solute Cotransporters AT4G35300 72.470 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0011 - - mtr:MTR_3g118530 1254.97