Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5220 ATGGAAGCAAAAACTCATATAGTCCTTGTCTCTATTCCTGTCCTTAGCCATCAAGTTTCACTACTCGAATTTGCTAAACAACTCATTCATCTCTACAAAAACTCTTTCCATGTCACATGTATCATTCCCACAATTAGTAACTCTCCTTCTATTGCATCCAAACCCTTCTTTGATACCCTCCCTTCTAGCATTCAATGCATTTTCCTTCCTCCAATTAACTTTGACGATCTAAAGAATGAGGTTTTGCTTGAATCTCAAGTTCAAATCTCGGTTTCTAAATCTATGCCATATGTGTTTGAAACCTTAAGGTCAATTAGCACTAACTCCAATTTGGTTGCTCTAATTGTTGATGGGTTTGCACATGAAGCACATAAGTTTGCTAAAGAATTGAGTATCTTATCCTACACATACTTTCCTGGTTCGGCAATGGTTTTGTCAATGTGCCTATACTTCTCAAAGCTGGATAAAATAATTACTTGTGAGTACAAGGATCATCCCACACCAATAGAGATTCCAGGTTGCATATCTCTTCATGGCAGAGATCTCCCAGACAGTGTACAAGACAGATCAAATTTAGCATACAATTTATTTCATCATCGCTCCCAACAACTTCATCAAGCTGATGGCATCATAATCAATAGCTTTCATGAATTGGAATCAGAAACATTTGAAGCAATATCTCAAAATGGTCCATATGGTCCTAATGTGTATCCAGTAGGGCCTATAATACAAACAAGACGCAATATTAAAAATCAAGCATGTGAATGTGTACTATGGTTAGACAATCAACCACCTAACTCAGTCATCTACATTTCATTTGGAAGTGGTGGCACACATTCACAAGACCAAATTAATGAGCTTGCATTGGGGTTAGAATTGAGCAAATATAAATTTCTATGGGTTAATTGGAGACAACCAAATGATAAAGCAAGTGCTAGTTACCTAAGTAATGATGAAGTGGATCCATTACATTTTTTACCATTAGGGTTTTTGGAAAGAACAAAAGGACAAGGTTTTGTTATGTGTGGTTGGGCACCACAAGTTGAAGTACTTAAGCATGATGCAATAGGTGCATTTCTAACTCATTGTGGTTGGAATTCTATTTTGGAGAGTATTGTTCATGGAGTTTCAATGATTGCTTGGCCATTATTTGCTGAACAAAGAAGCAATGCTGAATTGATGACTAATGGACTTAGAATTGCTATGAGACCAAAATATGATAGCAAAGGAATTGTGGTAAAGGAGGAAGTGGTTAATGTTATAAAAGGTGTTATGGAGAGTGAAGAAATTGGAAGAAGAATGAAAGAATTACAAAAGTTTGCTAATTGTGCTATGATGGAAGATGGGTCATCCATGAAAACATTCTCTATGTTGGCACTCAAATGGAAGAGCTTGGGAAAGTCCATGTAG 1410 0.366 MEAKTHIVLVSIPVLSHQVSLLEFAKQLIHLYKNSFHVTCIIPTISNSPSIASKPFFDTLPSSIQCIFLPPINFDDLKNEVLLESQVQISVSKSMPYVFETLRSISTNSNLVALIVDGFAHEAHKFAKELSILSYTYFPGSAMVLSMCLYFSKLDKIITCEYKDHPTPIEIPGCISLHGRDLPDSVQDRSNLAYNLFHHRSQQLHQADGIIINSFHELESETFEAISQNGPYGPNVYPVGPIIQTRRNIKNQACECVLWLDNQPPNSVIYISFGSGGTHSQDQINELALGLELSKYKFLWVNWRQPNDKASASYLSNDEVDPLHFLPLGFLERTKGQGFVMCGWAPQVEVLKHDAIGAFLTHCGWNSILESIVHGVSMIAWPLFAEQRSNAELMTNGLRIAMRPKYDSKGIVVKEEVVNVIKGVMESEEIGRRMKELQKFANCAMMEDGSSMKTFSMLALKWKSLGKSM* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5220 469 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 466 - -
Psa4g5220 469 Gene3D Glycogen Phosphorylase B; 251 446 - -
Psa4g5220 469 PANTHER GLYCOSYLTRANSFERASE 1 466 - -
Psa4g5220 469 CDD GT1_Gtf-like 6 441 IPR002213 GO:0008194
Psa4g5220 469 Gene3D Glycogen Phosphorylase B; 6 451 - -
Psa4g5220 469 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 249 396 IPR002213 GO:0008194
Psa4g5220 469 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5220 Psa-Chr4 445099024 445101578 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5220 2 464 Glycosyltransferase AT1G01390 43.100 6.21e-126 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5220 K08237 - gmx:100775351 589.726