Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5185 ATGGGGATGGTCATGAGTTACATGGGAGGAACAGGTGAGGGAATAGCCTCCCAAACTTTAAGTTTTGTATCTGGAGCATTGTATGATCAATTTATGAAGAAAGAAATCAAAAACTTTGATGCCTTCCACACTGCAATTCTTGATATCTTCAACACTATCAACATGGCCTTGCCTGGTAAGCATTATGATGCACCATCAAACAAGGAAATTGAGGACTTTTTTAAACTATGGCATAAATCAGAGGAAGAAGACAAGAACAGAATTTTCACTGATTTCATGATTAAGAATGTGAATATCAGTAAAGTCGATGATTCTATGATGATCACCGGAATCGTTGCACCTCCGGCAGCTATGGTAGCTAAAAGATCAGGACAATCTTTGCCTCAGCTGAGTCTCATGAAATCCATACCTGATGTTATCTTTGTCCCAACCGCTACGATTTTGGCTCTCATTGCTGTTAAAGTTACCAAGAGAATGACATTGAAGAAATTGAATCCTGTTTAA 504 0.3849 MGMVMSYMGGTGEGIASQTLSFVSGALYDQFMKKEIKNFDAFHTAILDIFNTINMALPGKHYDAPSNKEIEDFFKLWHKSEEEDKNRIFTDFMIKNVNISKVDDSMMITGIVAPPAAMVAKRSGQSLPQLSLMKSIPDVIFVPTATILALIAVKVTKRMTLKKLNPV* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5185 167 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 5 159 - -
Psa4g5185 167 PANTHER CALCIUM ION-BINDING PROTEIN 5 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5185 Psa-Chr4 444380959 444383630 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5185 1 147 EF-hand Containing Proteins AT1G64850 21.795 5.26e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5185 - - var:108347314 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5185 4 444380959 444383630 Psa4g5185 4 444380959 444383630 ECH
Psa4g5185 4 444380959 444383630 Psa3g4432 3 416896967 416898150 PCT