Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5182 ATGAGTGCAGATTCTAATTCTTATGGAAACGCTACGGATCTATTGCATCAGCTGGAGGATATCCTTGAATCTGATGCTCTAATTGATGAGCTGGGGTTTATTCATCCATCCCAGTTTTCCCTGTTAAATGAGGAATCTGGAATTGCGGCAAATTTATCTGATGAAGCAGTTCATCTATCAGCCAACAGGATAGCAGGCTCTGAAGAATATTCCAAACAAGAGAGACTATACTTCTGGAACAGAGATCATAAATTGGGAATTTCAACTGATGTTCTTCTACCGTTATATAAAGCTGCCAAACATGAATTTATGACGACATTTAAACAATATAAGATGTGTGGAAATCAATCTGACAAAGTTGGACTTTGTTTACGTGCTACAGCATCCGATGACCATCTTGAAAGCATACTTTTGAGACACAGCAGGTCTCTTCTGCTGCTAAGCTGTGATTTCATGACTGCTTGGAATTGCAGAAAGTTATTAGTGTCCAAGAAGAAGCAGGTCTCAATGTTTGTAGATGAACTTCAACTATCAGAACTTGTGCTATCATACTCGGCCAAAAGTGAACAAGCTTGGAATCATAGGCGATGGGTGATCAAGTCAATCTCTGCAAACTGTTCAAATTTCAAAGAGATTTTGGCAAAAGAATCAGAGCTGGTGGCAAAAATAGCTGAGAGATCAAAGATGAATTATCGTGCATGGAATCACCGATGCTGGTTAATCTCATACATGACTAAAGAACAGGTGCTATCTGAGATGAGGAAATCCAGAAGTTGGGCTGCGCTACATGTTTCTGATAATAGTTGCTTTCATTATCGCAGACGGCTCCTGCAAAAGATTATGGAAGACCAAAGTTGTGCGGAAGAAACTGCATCTTGCGGTCATAATGCTGATATTGTTCAAGCAATGAAGGATGAACTTGAATGGAATGAAACATTGATAAAGCGTTATGTCGGAAGAGAGGCTCTATGGCTTCATCGTCGCTTCCTTTCCTCATGCTGGATAAATAGTTTCCTAACTGACTCTAATGACGGATCCTACCATTCCAAGGAGGCAACAAACATGTATCATGACTTTAGCACCTTTCTGCAGAAGGAATCAAGTCTCCTTCACGCCTCAACTTTTGTTGATGATGATTATGGAGATTTCCAAGCACAAGCCACACATTCTGCTAGTTACATACTGTGGTTAAAAGTGCAATTGCCCAAGCCTCTTGAAAACGAGCTCCTTGAAAAGATAAAAGATGTAGATTTGAAGACCTTATTGGATAAGACATGCCCAGAGAGATCCTCTCTATTCAATTACTTTATGAGCTAG 1317 0.4002 MSADSNSYGNATDLLHQLEDILESDALIDELGFIHPSQFSLLNEESGIAANLSDEAVHLSANRIAGSEEYSKQERLYFWNRDHKLGISTDVLLPLYKAAKHEFMTTFKQYKMCGNQSDKVGLCLRATASDDHLESILLRHSRSLLLLSCDFMTAWNCRKLLVSKKKQVSMFVDELQLSELVLSYSAKSEQAWNHRRWVIKSISANCSNFKEILAKESELVAKIAERSKMNYRAWNHRCWLISYMTKEQVLSEMRKSRSWAALHVSDNSCFHYRRRLLQKIMEDQSCAEETASCGHNADIVQAMKDELEWNETLIKRYVGREALWLHRRFLSSCWINSFLTDSNDGSYHSKEATNMYHDFSTFLQKESSLLHASTFVDDDYGDFQAQATHSASYILWLKVQLPKPLENELLEKIKDVDLKTLLDKTCPERSSLFNYFMS* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5182 438 PANTHER PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 25 398 - -
Psa4g5182 438 SUPERFAMILY Protein prenylyltransferase 125 337 - -
Psa4g5182 438 Pfam Protein prenyltransferase alpha subunit repeat 173 200 IPR002088 GO:0008318|GO:0018342
Psa4g5182 438 Pfam Protein prenyltransferase alpha subunit repeat 304 330 IPR002088 GO:0008318|GO:0018342
Psa4g5182 438 Pfam Protein prenyltransferase alpha subunit repeat 215 244 IPR002088 GO:0008318|GO:0018342
Psa4g5182 438 Pfam Protein prenyltransferase alpha subunit repeat 252 279 IPR002088 GO:0008318|GO:0018342
Psa4g5182 438 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 170 204 IPR002088 GO:0008318|GO:0018342
Psa4g5182 438 Gene3D Protein prenylyltransferase 99 418 - -
Psa4g5182 438 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 212 246 IPR002088 GO:0008318|GO:0018342
Psa4g5182 438 PANTHER PROTEIN PRENYLTRANSFERASE ALPHA SUBUNIT REPEAT-CONTAINING PROTEIN 1 25 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5182 Psa-Chr4 444295154 444302909 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5182 K14137 - gmx:100807426 704.131