Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5175 ATGCTCAGGAAGAGTCAGAGTGATGAAAGAATTATTCCTCTCCCTGAAATCACAGGCGTACGGAGGGCAAAGACAGCTGGGATATTTCCCAATGCCATTGAGATTCTTTCCGGAAGCAAGAAGCACTTCTTTGCATCCTTTCTATCCCGTGATGACGCTTTTAAGATTATTAATGACGGATGGTTGCGACAGGGAAACGATGCCAGAGTAATAATGGAACAGCAGGAATCAATGTCGGAGTCCAGCGGCCAAGAGGTTGGATTCGTAAATGTTGAAAATGTCAAAAGTTCTGATATACTTGACAATGAGGCACTTTCTACTGACCCGAGCGAAGGTACTTCTATTTGCAAAGATGTGGGAGTTCCATCCATTGTTGAAGAAGGCCCTATATTGATGGTTGTTCCAGAGAAGCAATCCAGTGTTGAAGAAGTTGCTGAGTCTGAATTGAATAATAATAACCCCCCTAGAGTGAGTTGGAGCTGGAATGAGGAGGATATTGATGCTCCGACAACCCCAGAAGCTTATACGTGTGTTGCAGAATCAATATTTCCGATAAAGGTTGAAGACTTCTTTAGGTACTTTTTCTCGGATGATGCTGTAAATTTTCTTGATTCTTTCCGTAAAAGATGCGGCGATAAAGATTTTAAGTGTGCTTCATGGCATCCTCAAGAGAAATTTGGATATTCCCGTGATCTGTCATTTCAACATCCAATAAAAATTTATCTTGGAGCAAAATTGGGTGGCTGCCACGAGGTTCAGAAATATCGAGTTTATAGGAACAGTCATTTGGTTATACAAACATCGCAAGAAGTTAGTGACGTCCCTTATGCAGATTATTTTCAAGTTGAGGGGCTGTGGAGTGTAGAGAGAGACAAAGATGAATCAAAAGAACGCTGCAATTTACGGGTATATGTGAATGTGGAATTTTCCAAGAAAACTATCTGGAGAGGCAAAATAGTACAATCCACAGTTGATGAATGTAGAGATGCTTATGCAACGTGGATGGACATGGCACACGAGTTCTTGAAACAGAAGAATCTTGTAAAACAAGAAAATGTTCCCATTGCTGCTGTAGTTCAAAATGGAAAAATGAATTTTGACAGAGAAGCAAAGACTGGAGAATCTTCAGAAGGATCACAGGATCAAAGTAATCCTACAAGGGGACAAACTACATCCAATGTCATTGATGCTATTCACAATGTTAGTTCTCAATTGCAAGGAAACTTCATTGACACGTCGTCTGTTCCATCTTTGTTCAAAGAGTTTGCGACAAAGATTAGGTCATCTTTGAAAAGTCAGAGCAATCTGTCACTGATCCTAGTTGCCATTTTTGCTCTGATTTTCGTCATGCAGTTTAGCATACTTGTGCTCTTATCCAGACCTCAACATATACATATGAACTCTCCTGTAGACTTTATGAATAAGATGGACAATGGAGTAACTAGAAGTTCTTCAGAGATAGCGTGGCTAGAGAAAAGAGTTCATCACCTTAAAGATGAGATGGACATGGTTGAGACTAGGCTTGAAAGAATGCGGTATGAACACGCACTCTTAAAAAAGCAAATAAATGATCTAGAACATAAATAG 1587 0.3995 MLRKSQSDERIIPLPEITGVRRAKTAGIFPNAIEILSGSKKHFFASFLSRDDAFKIINDGWLRQGNDARVIMEQQESMSESSGQEVGFVNVENVKSSDILDNEALSTDPSEGTSICKDVGVPSIVEEGPILMVVPEKQSSVEEVAESELNNNNPPRVSWSWNEEDIDAPTTPEAYTCVAESIFPIKVEDFFRYFFSDDAVNFLDSFRKRCGDKDFKCASWHPQEKFGYSRDLSFQHPIKIYLGAKLGGCHEVQKYRVYRNSHLVIQTSQEVSDVPYADYFQVEGLWSVERDKDESKERCNLRVYVNVEFSKKTIWRGKIVQSTVDECRDAYATWMDMAHEFLKQKNLVKQENVPIAAVVQNGKMNFDREAKTGESSEGSQDQSNPTRGQTTSNVIDAIHNVSSQLQGNFIDTSSVPSLFKEFATKIRSSLKSQSNLSLILVAIFALIFVMQFSILVLLSRPQHIHMNSPVDFMNKMDNGVTRSSSEIAWLEKRVHHLKDEMDMVETRLERMRYEHALLKKQINDLEHK* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5175 528 Pfam VAD1 Analog of StAR-related lipid transfer domain 178 325 IPR031968 -
Psa4g5175 528 ProSiteProfiles VASt domain profile. 174 346 IPR031968 -
Psa4g5175 528 PANTHER PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC 9 526 - -
Psa4g5175 528 Coils Coil 487 528 - -
Psa4g5175 528 Gene3D - 3 64 IPR011993 -
Psa4g5175 528 MobiDBLite consensus disorder prediction 369 389 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5175 - - gmx:100805910 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5175 4 444102125 444113341 Psa4g5175 4 444102125 444113341 ECH