Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5173 ATGGCGACAATTAACCCTTTTGATTTGTTGGGTGACGATGCTGAAGATCCTTCACACTTGATTGCTGCTGAACAACTCAAAGCGGCGGCTGCGGCTGCGGCTGCTCCCAAAAAGGGTTTGGAACAAGGCAAACAAGTTGCTCCCAAAAAGGCTGCTCTTTTGCCTTCCAAACCACTACCTCCCTCTCAGGCTGTGAGGGAGTCAAGAAACGAACCATCTCGTGGTGGCCGTGGAGGCGGTCGGGGATATGGAGGAGGATTTGGACGTGGTCGCGGTGGTGGCGGCGGCTTTGGTCGTGACTTTTCCAACGACGATAACTCCTCTTCACTGCCTGTTCCTCCTGCTAATCAAGGTTCTTTTGAAGGAGATTCTGGGAATCCCTCTGAAAGGCGTGGTTATGGTGCACCTCGTGCTCCTTACCGTGTCGGTGGAGGTGGCGGTCGTCGTGGAGGATTTAGCAACGGTGAAGGTGGTGAAGAAGGACGTCCACGAAGGACATTTGATCGCCACAGCGGGACTGGACGAGGAGGCGGATTCAAACGTGAAGGTGCTGGACGTGGTAATTGGGGAACTCAGTCGGATGAAATTGCTCAGGTGACTGATGAAGTTGCTAACGAAACCGAAAAGAATGTGTCTGAGGAGAAGCCTGCTGGTGAAGAAGATGCAGCTGCTGAAGGAAACAAAGAAGCACCTGCTAATGAAGCTGAAGAAAAGGAGCCTGAGGACAAGGAAATGACACTAGAAGAATATGAGAAAGTTTTAGAAGAGAAAAGGAAAGCTCTGCAGGCACTCAAGGTTGAGAGCAGAAAGGTGGACACAAAAGAGTTTGAATCCATGAAGCCACTTTCTTGCAAGAAAGAAAATGATGAGATCTTTGCTAAACTGGGATCTGACAAGGACAAACGCAAAGATGCCTTTGAAAAGGAAAAGGCAAGGAAGGCTCTGAGCATCAATGAGTTTCTTAAGCCTGCTGAAGGGGAGAAGTATTACAGCCCAGGTGGACGAGGTGGACGCGGACGTGGTGGTCGTGGTGGTTCAAGGGGAGGAGGAGGTTATGTTGGAAATGCATACAGCAATGCGCCAGCCCCATCTATTGAGGATCCGGGTCAATTCCCAACCTTGGGTGGTGGCAAGTGA 1137 0.5066 MATINPFDLLGDDAEDPSHLIAAEQLKAAAAAAAAPKKGLEQGKQVAPKKAALLPSKPLPPSQAVRESRNEPSRGGRGGGRGYGGGFGRGRGGGGGFGRDFSNDDNSSSLPVPPANQGSFEGDSGNPSERRGYGAPRAPYRVGGGGGRRGGFSNGEGGEEGRPRRTFDRHSGTGRGGGFKREGAGRGNWGTQSDEIAQVTDEVANETEKNVSEEKPAGEEDAAAEGNKEAPANEAEEKEPEDKEMTLEEYEKVLEEKRKALQALKVESRKVDTKEFESMKPLSCKKENDEIFAKLGSDKDKRKDAFEKEKARKALSINEFLKPAEGEKYYSPGGRGGRGRGGRGGSRGGGGYVGNAYSNAPAPSIEDPGQFPTLGGGK* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5173 378 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 377 IPR039764 GO:0003723
Psa4g5173 378 Gene3D - 161 275 - -
Psa4g5173 378 MobiDBLite consensus disorder prediction 325 378 - -
Psa4g5173 378 Coils Coil 247 267 - -
Psa4g5173 378 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 377 - -
Psa4g5173 378 Pfam Stm1 1 79 IPR019084 -
Psa4g5173 378 MobiDBLite consensus disorder prediction 191 205 - -
Psa4g5173 378 MobiDBLite consensus disorder prediction 158 176 - -
Psa4g5173 378 MobiDBLite consensus disorder prediction 206 246 - -
Psa4g5173 378 MobiDBLite consensus disorder prediction 101 124 - -
Psa4g5173 378 Pfam Hyaluronan / mRNA binding family 163 271 IPR006861 -
Psa4g5173 378 SMART HABP4_PAI_RBP1_2 163 272 IPR006861 -
Psa4g5173 378 MobiDBLite consensus disorder prediction 30 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5173 Psa-Chr4 443994894 443998461 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5173 K13199 - gmx:100791259 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5173 4 443994894 443998461 Psa4g5173 4 443994894 443998461 ECH