Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5161 ATGGCTAATTATTTCCTTTTATTCATGTTTGTTTTTGCTAGTCAAGTGATTGGTGGATTGAATACAAAGCTACCATCTCCATCCTATGGAAATACAATAACCATTCTCAGCATTGATGGAGGTGGTATTAAGGGAATTCTTCCAACTGTTGTTCTTGAGCACTTGGAAAACGCTCTTCAGATTGTGTCAAAAGATGAAAAAGCAGCACTAGCAGACTATTTTGATGTGATAGCAGGAACAAGTACAGGAGGAATCATTACTGGAATGCTAACTGCTCCTAACCCTAATGACACTTCACGTCCTTTATTTACTACTAAACAAATCTTACAATTCTACTTGGATTTTGGTCCTTCTATATTCAACCTAACTGCTGCTAGTGGTTGGAATAATAGTACTCCATATGCCAAGTTTGATGGGAAGTTCTTATATGAAATAGCACGTAAACTTTTGCAAGAAACACGTCTGCATGAAACTTTGACCAATGTTGTAATTCCAACCTTTGATACCTATGAATTACAACCAGTTATCTTCTCAAGCTTTAAGTTAAAGACAGTTCCTAGTCTAGATGCAAAACTTTCTGACATATGTCTTGGGACTTCAGCTGCACCATCTCAACTACCACCCTATGAGTTTAGGAATGGTGATCATCATTTCAATCTAGTTGATGGGGCTCTCACTGCAAATAGTCCGGCCTTGCTTGCAGTAAGTGAAGTGATACAACAATTGAATGAGAAGAATTCTGATTTCGTTCCAATAAAAGCAAACGAGCCTATCAAAATCGTGTTGCTGTCAGTAGGAACAGGAAGTAGTCCAGAGACTCGAAGGATTCCGGCTATTCTGGCAAAGTACTTTTCCTTTAATGACTGGGTACCCATATTAGCTATAGGTTTGGGTATATCTGCTGGAAAAGTGAATGATTATCACCTTGAATCAGTGTTTCCAAGTGATTCATCTTCTTCTGACAATTATTACCTTCGAGTTGAGGAGTATAATTTGGATACATCCATAGCTGCGGATAATACTACTAAAGAAAACATGGAAAAGCTTGTAAAGGCAGGAGATGATTTGCTCAAACAGTCTGTTAAGGTTATGGATGTAACTTCTTTTCTTCCATACGAGAAACCAAGTGAGGGTACAAATGCTGAAGCTCTTGAAAGGTTGGCTGAAATTCTGTACAATGAGAGGAAGCTGCGGTTGAAAAGAAAATCGATGGAGAAACAAGGGCGACCATTTATTGAAGCTGTTACTTCTGCTTTCCAGATGACTTGA 1269 0.3846 MANYFLLFMFVFASQVIGGLNTKLPSPSYGNTITILSIDGGGIKGILPTVVLEHLENALQIVSKDEKAALADYFDVIAGTSTGGIITGMLTAPNPNDTSRPLFTTKQILQFYLDFGPSIFNLTAASGWNNSTPYAKFDGKFLYEIARKLLQETRLHETLTNVVIPTFDTYELQPVIFSSFKLKTVPSLDAKLSDICLGTSAAPSQLPPYEFRNGDHHFNLVDGALTANSPALLAVSEVIQQLNEKNSDFVPIKANEPIKIVLLSVGTGSSPETRRIPAILAKYFSFNDWVPILAIGLGISAGKVNDYHLESVFPSDSSSSDNYYLRVEEYNLDTSIAADNTTKENMEKLVKAGDDLLKQSVKVMDVTSFLPYEKPSEGTNAEALERLAEILYNERKLRLKRKSMEKQGRPFIEAVTSAFQMT* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5161 422 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 36 235 IPR002641 GO:0006629
Psa4g5161 422 Gene3D Cytosolic phospholipase A2 catalytic domain 23 404 - -
Psa4g5161 422 Pfam Patatin-like phospholipase 36 234 IPR002641 GO:0006629
Psa4g5161 422 PANTHER PATATIN 1 408 - -
Psa4g5161 422 PANTHER XYLOSE ISOMERASE 1 408 - -
Psa4g5161 422 SUPERFAMILY FabD/lysophospholipase-like 32 361 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5161 Psa-Chr4 443757993 443760763 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5161 24 406 Miscellaneous Gene Families AT2G26560 42.500 1.75e-90 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5161 - - cam:101513147 528.094