Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5152 ATGCAAGTCCTTCCAATTGTGTTGTCTAGAAACAAATATAATATGGCTGTTAACTACCTTTTGTTTGTGTTCTTTTTTGCTAGTCAGTTTATTGCTGGATTTAACACTGAGCTACCACCTTCTAACCATGAAAGTACTATCACCATTCTGAGTATTGATGGTGGTGCAGTAATTCTTAACCACTTGGAAAAGGCTCTTCAGGTTAAGGATAAAGAAGCATCACTTGCAAAATACTTTGATGTGATATCAGGAACTAGTACCGGAGGGCTTGTGACTGCTATGCTCGCTGCTCCTCATCCAGATGATCCTACTCGTCCTCTATTCACTGCTGAACAAGTTATCAACTTCTACCATCAATATGGTCCTTCAATATTCAACAAAACTAGTGGTTGGGATGCTACATACCCTGGTACAAAGTATGATGGAAAGTTCTTACATAATTTAGCAAACATTAACCAATGTTGTTATCCCAACTACATCAAGAAATTTCATCCTGTGACATTCTCAAGTTATAAGTTGAACGAAGTTTCAAGCTTAGATGCAAAATTATCAGATATATGCATTGGAACTTCAGCTGCACCAACTTATCTACCTCCATATCACTTTGAAAATGATGGTGCTGAATTCAACTTGGTTGATGGAGGTGTGGCTGCATGTAATCCGGCTATGGCTGCTGTGAGTGAAGTGATGAAAGAGAAGGGATGGAGGCATACAAAGATCTTGCTGTTGTCTATAGGATGTGGAAGTAAAGAGTTGAAAGGTTTTGATGCTGATGTTGCAACTCATTTCTCAGCTGCATTTTGGGCATCATCTGGTCTTGCTGAATATAAGTGGATCCATCGAATGGAAGCCATGGATAATGCTACAATAGCTAACATTGAAAATCTTGCAAAGGTAGGAGAGAGCCTTCTGAAAAAACCAGTTTTGAAAATGAATGTGAATACCTATGAGCCAGAGGAAAAAACAAACCATGGTACAAACGCTGAGGCTTTAGAGAAGTTGGCAGAGACTTTATACAAAATAAGGCAGTTTCGTCAAAAGAAGAATATGATGGAGAAGTTTATGGGACGACCACTTCTTAAAAATATTCCAAACCCTTTTGCTACTACAAGCTAG 1116 0.3871 MQVLPIVLSRNKYNMAVNYLLFVFFFASQFIAGFNTELPPSNHESTITILSIDGGAVILNHLEKALQVKDKEASLAKYFDVISGTSTGGLVTAMLAAPHPDDPTRPLFTAEQVINFYHQYGPSIFNKTSGWDATYPGTKYDGKFLHNLANINQCCYPNYIKKFHPVTFSSYKLNEVSSLDAKLSDICIGTSAAPTYLPPYHFENDGAEFNLVDGGVAACNPAMAAVSEVMKEKGWRHTKILLLSIGCGSKELKGFDADVATHFSAAFWASSGLAEYKWIHRMEAMDNATIANIENLAKVGESLLKKPVLKMNVNTYEPEEKTNHGTNAEALEKLAETLYKIRQFRQKKNMMEKFMGRPLLKNIPNPFATTS* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5152 371 PANTHER PATATIN 15 275 - -
Psa4g5152 371 PANTHER PATATIN 275 355 - -
Psa4g5152 371 SUPERFAMILY FabD/lysophospholipase-like 47 317 IPR016035 -
Psa4g5152 371 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 50 226 IPR002641 GO:0006629
Psa4g5152 371 PANTHER XYLOSE ISOMERASE 275 355 - -
Psa4g5152 371 PANTHER XYLOSE ISOMERASE 15 275 - -
Psa4g5152 371 Pfam Patatin-like phospholipase 72 225 IPR002641 GO:0006629
Psa4g5152 371 Gene3D Cytosolic phospholipase A2 catalytic domain 37 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5152 Psa-Chr4 443494530 443496720 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5152 38 349 Miscellaneous Gene Families AT2G26560 37.245 2.04e-56 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5152 - - gmx:100802114 399.438