Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5149 ATGCAAGTCCTTCCAATTGTGTTGTCTAGAAACAAATATAATATGGCTGTTAACTACCTTTTGTTCGTGTTCTTTTTTGCTAGTCAGTTTATTGCTGGATTTAACACTGAGCTACCACCTTCTAACCATGAAAGTACTATCACCATTCTGAGTATTGATGGTGGTGCAGTAATTCTTAACCACTTGGAAAAGGCTCTTCAGGTTAAGGATAAAGAAGCATCACTTGCAAAATATTTTGATGTGATATCAGGAACTAGTACCGGAGGGCTTGTGACTGCTATGCTCGCTGCTCCTCATCCAGATGATCCTACTCGTCCTCTATTCACTGCTGAACAAGTTATCAACTTCTACCATCAATATGGTCCTTCAATATTCAACAAAACTAGTGGTTGGGATGCTACATACCCTGGTACAAAGTATGATGGAAAGTTCTTACATAATTTAGCAAGTGAATTATTGAAAGATACAAAACTGAGTCAGACATTAACCAAGTGTTGTTATCGCAACATTTTGAACATCAAGAAATTTCATCCTGTGACATTCTCAAGTTATAAGTTGAACGAAGTTTCAAGCTTAGATGCAAAATTATCAGACATATGCATTGGAACTTCAGCTGCACCAACTTATCTACCTCCGTATCACTTTGAAAATGATGGTGCTGAATTCAACTTGGTTGATGGAGGTGTGGCTGCATGTAATCCGGCTATGGCTGCTGTGAGTGAAGTGATGAAAGAGAAGGGAGGGAGGCATACAAAGATCTTGCTGTTGTCTATAGGATGTGGAAGTAAAGAGTTGAAAGGTTTTGATGCTGATGTTGCAACTCATTTCTCAGCTGCATTTTGGGCATCATCTGGTCTTGCTGTTGGTGCACTGCTGCTAAGGATATGA 888 0.3941 MQVLPIVLSRNKYNMAVNYLLFVFFFASQFIAGFNTELPPSNHESTITILSIDGGAVILNHLEKALQVKDKEASLAKYFDVISGTSTGGLVTAMLAAPHPDDPTRPLFTAEQVINFYHQYGPSIFNKTSGWDATYPGTKYDGKFLHNLASELLKDTKLSQTLTKCCYRNILNIKKFHPVTFSSYKLNEVSSLDAKLSDICIGTSAAPTYLPPYHFENDGAEFNLVDGGVAACNPAMAAVSEVMKEKGGRHTKILLLSIGCGSKELKGFDADVATHFSAAFWASSGLAVGALLLRI* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5149 295 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 50 239 IPR002641 GO:0006629
Psa4g5149 295 PANTHER PATATIN 15 290 - -
Psa4g5149 295 Pfam Patatin-like phospholipase 66 238 IPR002641 GO:0006629
Psa4g5149 295 SUPERFAMILY FabD/lysophospholipase-like 47 264 IPR016035 -
Psa4g5149 295 Gene3D Cytosolic phospholipase A2 catalytic domain 37 291 - -
Psa4g5149 295 PANTHER XYLOSE ISOMERASE 15 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5149 Psa-Chr4 443424800 443426542 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5149 39 281 Acyl Lipid Metabolism Gene Families AT4G37070 43.866 4.69e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5149 - - gmx:100802114 348.206