Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5105 ATGGATAAATCAATTCATATTGCAGTTGTTCCTGGTGTTGGATACAGCCATTTGTTCCCACTTCTTCAATTCTCCAAACTACTTGTTCATCTTCATCCATATTTTCATGTCACATGTCTCATTCCTTCACTTGAATCTCCTCCATCTGATTCCAAAACAATCCTTCAAACTCTTCCATCAAACATCAACTGTACTTTTCTTCCATCAGTACACTCCAATGATCTTCCACGAGGAATCCCCTTAGAAACTCAGCTTCAACTCACACTGACTCACTCATTGCCATCAATCCATCAGGCCTTGAAGTCCTTATCTTTAAGGACACCCCTTGTGGCATTACTGGTTGATTCTTTTGCAGTTAAAGCATTGGATTTGGCTAAGGAGTTCAACATGTTGTCTTATGTTTACTTCCCTTCTGCAGCTACCACTTTGTCTTCTTACTATCATTTGCTCAAATTGGATAAGGTGACATCATGTGAGTATAGAGATCTTCCAGAGGCTATCCAATTACCAGGGTTTGTACCGATTCACGGTCGCGATCTTGTTGATCAAGCTCAAGATAGATCAAGTCAATCTTATAAACTGTTACTCGAGCGAGTTGAGAGAATCCGTCTTGTTGATGGGATTCTTATTAATAGCTCCCTAGAAATTGAAAGAGGATCTATAGAAGCACTGACGGAAGAAGGAAGTGGTAACCCTCCTGTGTATGCAGTTGGGCCTATTGTCCAAAAGGGAACAAGAGATGGTGATGATGATGTTAAAGGATTGGAGTCTCTGTCATGGTTGGATAAACAGAAACCATGTTCGGTTTTGTATGTTTCTTTTGGGAGTGGTGGCACACTTTCACAAGAACAGGTTAATGAGTTGGCTTTTGGTTTGGAATTGAGTAATCAGAAGTTCTTATGGGTGTTAAGAGCGCCGAGTAGTTCGGCGAATTCTGCATATCTTTCGCAAAATGATGTTGATCCTTTGCAGTTTTTACCATCTGGGTTTTTGGAGAGAACTAAGGAAAAAGGTTTGGTTATTCCATCATGGGCACCACAGATTCAAATTCTTAGTCACAGTTCAGTTGGAGGGTTCTTGACTCATTGTGGTTGGAATTCAACTCTTGAGAGTATGGTCCATGGTGTGCCGCTGATCACATGGCCTTTGTTTGCGGAGCAGAGAACGAATGCGGTTATGCTGAGTGAGGGCTTAAAGGTTGGACTGAGGCCAAGACATGATGAGAATGGTATTGTGGAAAGAGTACAAATTTCTGAGTTGATCAAGCGTCTAATGGAAGGAGAAGAAAGCGAGAAACTGCGCAATAATATGAAGGAGTTGAAAGAAGCTGCTAATAGTGCAGTTAAAGAAGATGGATCTTCTACAAAGACTCTTTCTCAATTGGCACTCAAATGGAGAAATTTGGTATAG 1410 0.4106 MDKSIHIAVVPGVGYSHLFPLLQFSKLLVHLHPYFHVTCLIPSLESPPSDSKTILQTLPSNINCTFLPSVHSNDLPRGIPLETQLQLTLTHSLPSIHQALKSLSLRTPLVALLVDSFAVKALDLAKEFNMLSYVYFPSAATTLSSYYHLLKLDKVTSCEYRDLPEAIQLPGFVPIHGRDLVDQAQDRSSQSYKLLLERVERIRLVDGILINSSLEIERGSIEALTEEGSGNPPVYAVGPIVQKGTRDGDDDVKGLESLSWLDKQKPCSVLYVSFGSGGTLSQEQVNELAFGLELSNQKFLWVLRAPSSSANSAYLSQNDVDPLQFLPSGFLERTKEKGLVIPSWAPQIQILSHSSVGGFLTHCGWNSTLESMVHGVPLITWPLFAEQRTNAVMLSEGLKVGLRPRHDENGIVERVQISELIKRLMEGEESEKLRNNMKELKEAANSAVKEDGSSTKTLSQLALKWRNLV* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5105 469 Gene3D Glycogen Phosphorylase B; 250 449 - -
Psa4g5105 469 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 269 394 IPR002213 GO:0008194
Psa4g5105 469 ProSitePatterns UDP-glycosyltransferases signature. 344 387 IPR035595 -
Psa4g5105 469 Gene3D Glycogen Phosphorylase B; 6 454 - -
Psa4g5105 469 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 468 - -
Psa4g5105 469 CDD GT1_Gtf-like 6 444 IPR002213 GO:0008194
Psa4g5105 469 PANTHER GLYCOSYLTRANSFERASE 1 468 - -
Psa4g5105 469 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 461 - -
Psa4g5105 469 Coils Coil 423 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5105 Psa-Chr4 441944281 441946655 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5105 6 466 Glycosyltransferase AT1G01420 48.498 1.06e-153 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5105 K08237 - gmx:100778639 632.869