Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5087 ATGTCACCGATGCAACAGACACATTATCATCACTGCTTTTTCTCCCTTTTCTTTTCTCATTGCTTTCAAATAAATAATCTCAAATATTTCACACTCTCATACTCATGGTTTTCAATGCGATCATTAACATTAACGCCGCGAACCATGCCGGAAATCCCCGTCGATTTCCGTGCACCTCCACCATCTCCGGTTGCCTCCGGACGTAGATCATCGGTAACAAACAACGAATTTCTGACTGAGTTTTTGGAAACATCGCTTCGAGTTCCGGATCTGGTGTTACCGGACAAGATTTTCCCGAAACAGAGCCATCACGAAACGCCGCCGAAAATCGATTTTGTTTCATTGTGTTTCCACGAAGACGAAGATCTAATCGACGTCGTTTCGGACTCCATAGCCAATTTCGCATGCATCCAGCTTATCAACCACGGAATATCGCCGCAAATAATGGCTGCCGCCGTCGAAGCTGCCAGAGGAATATTTCTGGTGCCGCCAGGAAAGCGAGAAGTGGTATCAAGATCGCCGGAGAAGCTTTGGGGTTTCGAGGTGTATCATGAAGGAGAAGATGAGGGAAGTGAGTTGAATGAAGAATTTATTTGGTGCAAAGATGAAGAGTTGAAGTTGAAATTGGAGGGAATTTGGCCTATTGGATATTCTAATTTTAGCAAGAAGATGGAAACTCTAGGGTCACGTGTGGAGAAGGTGGCAGATAAATTATTTCCTATCATATTGAAAAATGTTCCTAAGAAATTAGCAAGTGATGGTGACATAATTGGTCATGGACATGAAGTTGGGACACTTTGTTGCATATACAAGCATACCAGAGATGTTAATAGGAATGATCGATGGGTTGATTCTTTGAAATATGATGTGATTAGGATGCTGATTAGAGGAACTGATTACTCTCATTCTTTGTGTTTGCATGTGTGTGATGGTTCTTCAGAGTTTCATGTTTACTCTAAGAAAAGTTGGTTGTCTTTCTGTCCTGAACAAGGTGCTCTTGTTATCACTGCCGGAGATCAATTACAGATATTGAGTGGTGGACACTACAAGGATGTGATTGGAAAGGCAATCTTTAAAGGAGAAAGAGAAGACAACATTTCAATGGCTTTTCTCTATTCTACTCAAAACATGAAGAAAAAAATTCAAAGCCATAGAGAAAGAACCATTTCAATTAGCCAACAAGCCATCTTTGCTGTAATTTTGACACTTATGTACCATGTCCTGATTTTTGTCTTGAATTTTTTTGATGTTTGA 1254 0.4059 MSPMQQTHYHHCFFSLFFSHCFQINNLKYFTLSYSWFSMRSLTLTPRTMPEIPVDFRAPPPSPVASGRRSSVTNNEFLTEFLETSLRVPDLVLPDKIFPKQSHHETPPKIDFVSLCFHEDEDLIDVVSDSIANFACIQLINHGISPQIMAAAVEAARGIFLVPPGKREVVSRSPEKLWGFEVYHEGEDEGSELNEEFIWCKDEELKLKLEGIWPIGYSNFSKKMETLGSRVEKVADKLFPIILKNVPKKLASDGDIIGHGHEVGTLCCIYKHTRDVNRNDRWVDSLKYDVIRMLIRGTDYSHSLCLHVCDGSSEFHVYSKKSWLSFCPEQGALVITAGDQLQILSGGHYKDVIGKAIFKGEREDNISMAFLYSTQNMKKKIQSHRERTISISQQAIFAVILTLMYHVLIFVLNFFDV* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5087 417 Pfam 2OG-Fe(II) oxygenase superfamily 295 372 IPR044861 -
Psa4g5087 417 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 50 413 - -
Psa4g5087 417 SUPERFAMILY Clavaminate synthase-like 96 376 - -
Psa4g5087 417 Pfam non-haem dioxygenase in morphine synthesis N-terminal 108 195 IPR026992 -
Psa4g5087 417 Gene3D - 81 396 IPR027443 -
Psa4g5087 417 PANTHER - 50 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5087 Psa-Chr4 441042080 441043995 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5087 - - aprc:113851004 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5087 4 441042080 441043995 Psa4g5087 4 441042080 441043995 ECH