Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5086 ATGGATAGTAATTTAAGTCGAAGTATAAGTCGGAGTTTGAGTAGATCAAGTTGGAAAATGGAAGAAGTGTTTGCTAGTGGAAGATATTCAAGAAGAACTTCCCAAGTTGATGAAGATGAAGAAGCACTTAAATGGGCTGCAATTGAGAAATTACCAACCTATGATAGGTTAAGAACAAGTATTATGCAAACATTTACCGAAGAACCTCATCAAGGAAACAGGATGCAACATAAAGAAGTTGATGTTAGGAAGCTTGATATGAATGAAAGACAACAAATTATTGACCAAATTTTCAAGGTTGCTGAAGAAGATAATGAAAAGTACCTCAAGAAATTCAGAAACAGAATTGAAAAAGTTGGAATAAGACTTCCAACCGTTGAAGTAAGGTTTAAGAATTTAACAGTTGAAGCAGATTCCTATGTTGGAAGCAGAGCTTTACCAACATTACCAAATGTTGCATTAAACATTGTCGAATCTGCTCTTGGAATGTTTGGAATTAGTACTGCAAAAAGAACAAAGCTCACCATTCTCAAAAATGCTTCTGGCATTATTAAACCATCAAGGATGGCCCTTTTACTTGGTCCCCCTTCATCTGGTAAAACAACCCTATTGCTGGCATTGGCTGGAAAATTGGATGCTGAATTGAGGCTTGCCAGAAGGGAAAAGGAAGCTGGTATATTTCCTGAAGCAGAACTTGACCTTTTCATGAAGGCTACTGCAGTGAAAGGAACAGAAAGTAGTCTCATTACTGATTATACTTTAAAAATTTTAGGGCTTGATATTTGTAAGGACACCATAGTGGGAGATGAGATGCATAGAGGTGTATCTGGTGGCCAAAAGAAACGTGTCACTACAGGTGAAATGATTGTTGGGCCCACAAAAACACTATTCATGGATGAAATATCAACTGGTCTAGATAGTTCAACAACATTTCAAATTGTGAAATGTTTGCAACAAATTGTTCACCTAAGTGAAGGGACAATCTTAATGTCACTTCTCCAACCGGCTCCTGAGACGTTCGATCTTTTCGATGACATTATTCTTATATCCGAGGGTCAAGTTGTGTACCAAGGTCCACGTGATCACATTGTCGAATTTTTTGAATCGTGCGGCTTTCGTTGCCCCGAAAGAAAAGGAACTGCCGATTTCTTGCAAGAGGTTACGTCAAGAAAAGACCAAGAACAATATTGGGCAGACAAAAACAGACCATACAGATATGTTTCTGTGACAGAATTTGCAAACAAATTCAAACAATTCCATGTCGGAATCCATCTCGATCAAGAATTATCCGTTTCGTTCGACAAATCAAGTGCACACAAAGCAGCTCTTGTTTACAGCAAAAACTCAGTTCCAACAATGGACATTCTCAAAGCATGTTGGGACAAAGAATGGCTTCTCATCAAAAGAAACTCATTCGTCTACATATTCAAAACCGCACAGATTTGCATCATTGCAATCATAGCTGCTACTGTTTTCTTGAGAACTGAAATGAAGAGGAATAATGAAGATGATGCTGCACTTTACGTTGGTGCAATTTTGTTCTCCATGATTATGAACATGTTCAATGGTTTCGCCGAACTTGCTCTTACGATTCAAAGACTTCCCGTGTTTTATAAACATAGGGATCATCTTTTCCATCCTGCTTGGACTTACACGCTCCCGAATTTTCTGTTGCGTCTTCCAATTTCGTTGTTTGAGTCTCTTGCTTGGATGGTTGTTACCTATTACACCATTGGATTCGCTCCTGAAGCCAGCAGGTTCTTTAAGCAATTGTTGTTGGTGTTCCTTATTCAACAAATGGCAGCTGGAATGTTTAGATTCATTGCTGGAACATGTAGGACGATGATTATTGCAAACACGGGTGGAGCTCTCATGCTTCTCGTTGTTTTTCTACTTGGTGGTTTCATCATTCCGAAACGTGAAATTCCTAACTGGTGGATGTGGGCTAATTGGGTTTCACCATTGTCATATGCTTTCCATTCTTTGACTGTCAATGAAATGTATGCTCCAAGGTGGATGCATCCAGGGAGTTCTTCAGATAATACTACAACATTGGGTTTAGCTGTGATGAAGAACTTTGATGTTTATGCCAACCCAAATTGGTATTGGATAGGTGCTGGAGCTCTTGCGGCTTTCACGGTTTTTTACAATGTTCTCTTCACCCTTTCGCTTATGTATCTAACTCCTCTCGGAAAGAAACAAGCGATTCTATCTGAGGAAGACGCGAGTGAAATGGAGAATGAAGGTGATGTAAATGAACCGAGACTCGTGAGGCCGCCTTCCACCCGAGATCCAATGCATCGATCATTGTCTAAAGCTGATGGAAATAATTCAAGAGAAGTAGCGATGCAAAGAATGAGTAGTCAAGCTAATCCAAATGGATTAAGAAATGCCGAGGGAGACGCTGGAAATGCGCCGAGAAGAGGAATGATTCTACCTTTTCAACCACTTGCGATGTCCTTTGACAGTGTTAACTACTTTGTAGACATGCCTGCAGAAATGAAAGAGCAAGGAGTGACAGAAGATCGGTTACAATTGCTTAGAGAAGTAACCGGTTCTTTTAGGCCCGGAGTTCTAACTGCGCTAATGGGAGTTAGTGGAGCGGGAAAGACAACTTTAATGGATGTTTTAGCTGGAAGAAAAACCGGTGGCTACATCGAAGGAGACGTTAGAATCTCCGGATTCCCTAAGAACCAAGAAACCTTTGCAAGAGTTTCTGGTTACTGTGAACAAACTGATATTCATTCCCCTCAAGTTACGATCAGAGAATCTTTGCTTTACTCGGCTTTCCTTCGGTTACCTAAAGAAGTTGGTGATGAAGAAAAAATACAATTTGTGGAGCAAGTGATGGATTTGGTAGAGCTGCAAAGTCTCAAGGATGCTATTGTGGGGCTACCAGGAGTTACAGGGTTGTCAACTGAACAAAGAAAGAGGCTAACGATCGCGGTCGAGCTTGTTGCTAATCCTTCGATTATATTCATGGACGAACCAACTTCAGGTCTAGATGCAAGAGCAGCAGCTATTGTTATGAGGACTGTAAGAAACACGGTCGATACTGGAAGAACAGTTGTTTGCACAATTCACCAACCTAGCATTGATATCTTTGAAGCCTTTGATGAGCTCATATTGATGAAAAGAGGAGGGCAACTGATCTATGGAGGACCTTTAGGTCGGAATTCACACAAGATTATCGAATACTTCGAGGAAATCCAAGGTGTCCCGAAAATCAAGGACATGTATAATCCTGCAACATGGATGCTTGAAGTTAGCTCCATAGCAGCCGAAGTCCGGCTTGGAATGGACTTTGCCGAATATTACAAATCATCAGCTTTGTTTCAGAGAAGCAAAGCTCTTGTTAAGGAACTAAGTACACCACCACCAGGAACAAGTGATTTGTTTTTCCCTACTAAGTACTCTCAATCAACCTTTGGACAATTCAAATCATGTCTATGGAAGCAGTGGTTGACATATTGGAGAAGTCCAGATTACAATCTAGTCAGATATTTTTTCACCTTGGCTTGTGCACTCATGATTGGGACAGTATTTTGGAAAGTCGGTAAAACCAGGGAGAGTTCGAGTGACCTAACACTGGTTATAGGATCGATGTACGCTGCAGTTATTTTTGTTGGAATTAACAACTGTCAAACAGTTCAACCAATCGTAGCCGTTGAAAGAACAGTGTTCTATAGAGAAAGAGCTGCTGGAATGTATGCTCCTTTGCCTTATGCCCTATCACAGGTTTTCATAGAAATACCATTTGTGCTATTTCAAACACTATATTACTCCATCATAGTGTATGCTATGGTGAGTTTTGAATGGAAAGCCGAAAAGTTCTTCTGGTTCGTCTTCGTCAGCTTCTTCTCCTTCTTGTACTTCACGTACTACGGAATGATGACGGTTTCCATTACACCAAACCATCAAGTTGCATCAATCTTCGCAGCCGCATTCTACGGACTCTTTAATCTCTTCTCTGGTTTCTTCATCCCAAGACCAAAAATTCCAGGATGGTGGGTATGGTACTACTGGATTTGTCCAGTGGCATGGACAGTGTATGGATTAATTGTATCTCAATATAGAGACATAGATGATCCTATTCGCGTGGTTGGATCTCTTAATCGAAATTTCACTGTCAAGGAATATATTGAAGACCATTACGGATTCAAACCTGATTTCATGGGTCCGGTTGCTGGAGTTTTGATTGCTTTCCCTTGTTTCTTTGCCTTTATATTTGCCTTCTGCATCAAGGCACTCAACTTTCAATCAAGATAA 4269 0.4045 MDSNLSRSISRSLSRSSWKMEEVFASGRYSRRTSQVDEDEEALKWAAIEKLPTYDRLRTSIMQTFTEEPHQGNRMQHKEVDVRKLDMNERQQIIDQIFKVAEEDNEKYLKKFRNRIEKVGIRLPTVEVRFKNLTVEADSYVGSRALPTLPNVALNIVESALGMFGISTAKRTKLTILKNASGIIKPSRMALLLGPPSSGKTTLLLALAGKLDAELRLARREKEAGIFPEAELDLFMKATAVKGTESSLITDYTLKILGLDICKDTIVGDEMHRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQQIVHLSEGTILMSLLQPAPETFDLFDDIILISEGQVVYQGPRDHIVEFFESCGFRCPERKGTADFLQEVTSRKDQEQYWADKNRPYRYVSVTEFANKFKQFHVGIHLDQELSVSFDKSSAHKAALVYSKNSVPTMDILKACWDKEWLLIKRNSFVYIFKTAQICIIAIIAATVFLRTEMKRNNEDDAALYVGAILFSMIMNMFNGFAELALTIQRLPVFYKHRDHLFHPAWTYTLPNFLLRLPISLFESLAWMVVTYYTIGFAPEASRFFKQLLLVFLIQQMAAGMFRFIAGTCRTMIIANTGGALMLLVVFLLGGFIIPKREIPNWWMWANWVSPLSYAFHSLTVNEMYAPRWMHPGSSSDNTTTLGLAVMKNFDVYANPNWYWIGAGALAAFTVFYNVLFTLSLMYLTPLGKKQAILSEEDASEMENEGDVNEPRLVRPPSTRDPMHRSLSKADGNNSREVAMQRMSSQANPNGLRNAEGDAGNAPRRGMILPFQPLAMSFDSVNYFVDMPAEMKEQGVTEDRLQLLREVTGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDVRISGFPKNQETFARVSGYCEQTDIHSPQVTIRESLLYSAFLRLPKEVGDEEKIQFVEQVMDLVELQSLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELILMKRGGQLIYGGPLGRNSHKIIEYFEEIQGVPKIKDMYNPATWMLEVSSIAAEVRLGMDFAEYYKSSALFQRSKALVKELSTPPPGTSDLFFPTKYSQSTFGQFKSCLWKQWLTYWRSPDYNLVRYFFTLACALMIGTVFWKVGKTRESSSDLTLVIGSMYAAVIFVGINNCQTVQPIVAVERTVFYRERAAGMYAPLPYALSQVFIEIPFVLFQTLYYSIIVYAMVSFEWKAEKFFWFVFVSFFSFLYFTYYGMMTVSITPNHQVASIFAAAFYGLFNLFSGFFIPRPKIPGWWVWYYWICPVAWTVYGLIVSQYRDIDDPIRVVGSLNRNFTVKEYIEDHYGFKPDFMGPVAGVLIAFPCFFAFIFAFCIKALNFQSR* 1423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5086 1422 Pfam ABC-2 type transporter 1145 1358 IPR013525 GO:0016020|GO:0140359
Psa4g5086 1422 Pfam ABC-2 type transporter 456 666 IPR013525 GO:0016020|GO:0140359
Psa4g5086 1422 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 214 1422 - -
Psa4g5086 1422 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 9 200 - -
Psa4g5086 1422 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 819 1071 IPR003439 GO:0005524
Psa4g5086 1422 MobiDBLite consensus disorder prediction 775 795 - -
Psa4g5086 1422 Pfam ABC-2 type transporter 1028 1088 IPR043926 GO:0140359
Psa4g5086 1422 Pfam ABC-2 type transporter 334 388 IPR043926 GO:0140359
Psa4g5086 1422 MobiDBLite consensus disorder prediction 760 774 - -
Psa4g5086 1422 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 840 1055 IPR027417 -
Psa4g5086 1422 Gene3D - 163 417 IPR027417 -
Psa4g5086 1422 MobiDBLite consensus disorder prediction 741 796 - -
Psa4g5086 1422 PANTHER ATP-BINDING CASSETTE TRANSPORTER 9 200 - -
Psa4g5086 1422 PANTHER ATP-BINDING CASSETTE TRANSPORTER 214 1422 - -
Psa4g5086 1422 Gene3D - 833 1066 IPR027417 -
Psa4g5086 1422 SMART AAA_5 186 353 IPR003593 -
Psa4g5086 1422 SMART AAA_5 856 1048 IPR003593 -
Psa4g5086 1422 Pfam ABC transporter 847 999 IPR003439 GO:0005524
Psa4g5086 1422 Pfam ABC transporter 177 301 IPR003439 GO:0005524
Psa4g5086 1422 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 161 376 IPR003439 GO:0005524
Psa4g5086 1422 Pfam ABC-transporter N-terminal 86 152 IPR029481 -
Psa4g5086 1422 CDD ABCG_PDR_domain2 816 1054 IPR034003 -
Psa4g5086 1422 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 391 IPR027417 -
Psa4g5086 1422 Pfam Plant PDR ABC transporter associated 672 736 IPR013581 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5086 Psa-Chr4 440969215 440977326 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5086 K08711 - gmx:100798588 2413.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5086 4 440969215 440977326 Psa4g5086 4 440969215 440977326 ECH