Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5024 AGGGATGATGTGGCAGAGTATAGCAAGCAACTGAGAAACTTGGCATTGAGATTGCTTGAAGCAATATCAGAGAGTTTAGGTTTAGAAAAAGATTACATAAACAAAGCATTAGGCAAACATGGACAACACATGGCTATTAACTACTACCCTCCATGTCCTGAGCCAGAACTAACATATGGTTTACCAGCACATGCTGACCCAAATGTTATCACTATTTTGCTGCAAAATGATGTTGTTGGTTTACAAGTTCTTAAGGATGGTAAATGGGTTACTATAAATCCTGTTCCTAACACCTTTATTGTCAATATTGGTGACCAAATTCAGGTGATAAGTAATGATAGGTATAAGAGTGTGCTGCATAGAGCATTGGTGAATAGTGAGAAAGAGAGGATGTCTATTCCAACTTTCTACTGTCCATCACCAGATGCAATCATGAAACCAGCTCCTCAACTCATAGACAATGATCATCCTGCTCAATACAAGGAATTTGAATATAATGAATACTTCAAGAAATTCTGGAATAGAGGGCTTTCAAAAGAAACATGTGTGGATATGTTCAAAGCTTAA 567 0.3721 RDDVAEYSKQLRNLALRLLEAISESLGLEKDYINKALGKHGQHMAINYYPPCPEPELTYGLPAHADPNVITILLQNDVVGLQVLKDGKWVTINPVPNTFIVNIGDQIQVISNDRYKSVLHRALVNSEKERMSIPTFYCPSPDAIMKPAPQLIDNDHPAQYKEFEYNEYFKKFWNRGLSKETCVDMFKA* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5024 188 SUPERFAMILY Clavaminate synthase-like 1 177 - -
Psa4g5024 188 Gene3D - 1 177 IPR027443 -
Psa4g5024 188 Pfam 2OG-Fe(II) oxygenase superfamily 42 139 IPR044861 -
Psa4g5024 188 PANTHER PROTEIN DMR6-LIKE OXYGENASE 2-LIKE 1 181 - -
Psa4g5024 188 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 1 181 - -
Psa4g5024 188 Coils Coil 4 24 - -
Psa4g5024 188 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 39 139 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5024 Psa-Chr4 437286088 437286957 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5024 1 187 Glycosyltransferase AT5G59530 34.737 8.78e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5024 K24028 - gmx:100787979 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5024 4 437286088 437286957 Psa4g5024 4 437286088 437286957 ECH