Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5005 ATGTTCTTGTTGTTCCTGAAAGGTATGTCACAAAAATCTTTTGTTTCGGTTCTTGTCCTTGTTTTTTCCTATGTTGTTATTGTGCTATCTACACCCCCGGAGGATCCAATCAAATGTTCTTCATCAAACAACACAACCTGCACAATCACAAACTCCTACGGAATGTTTCCTGATAGAACTATCTGCCAAGCTTCACAAGCTTTGTATCCAACAAATGAAAAAGAATTGGTATCAATGGTTGCGTCCGCGAGTAGAGCGAAAACAAAAATCAAAGTTGCGACGCGCTATTCACACAGCATACCGAAATTGGTATGTCCGGAAGATTCGAACGGGATATTAATAAGCACGAGATATCTCAACAAGGTAGTGAAAATCGACGTGGTTGAAAAAACGATAACGGTTGAAAGCGGCGTAACGTTGAAGGATTTGATCGATGAAGCTTCGAAAAATGGATTGGTTTTGCCGTATACGCCGTATTGGTATGGTTTGACGATTGGTGGATTGATGGGAACTGGTGCTCATGGAAGCACATTGTGGAATAAGGGAAGTGCTGTTCATGATTATGTGGTTGAGATTAGGATTGTTAGGGCTTCTGGTTCTGATGAAGATGGTTATGCTAAAGTTGAGATTCTTAATGAAAATAATGATGAAGATTTCAATGCTGCTAAAGTATCACTCGGTGTTCTTGGTGTTATTTCACAGGTTACTCTAAAACTAGAACCAATGTTCAAACGATCCATCACATATTTAGCAAAAAATGATTCAGATTTAGGATCAGAAGTGGTTAGTTTTGGACATGAACATGAGTTTGCAGACATAACATGGTACCCAAGTCAAATGAAAACTATATATAGATTTGATGCTCGTGTTCCTTTAAATACATCTGGCAATGGTCTCTATGACTTTCTTCCTTTTCGTCCAACTTCTTCACTTCTATTGGCTGGCATAAGAACACAAGAAGATCGAGATGAATCCACCGGTGATGCCGATGGAAAGTGCGGACTTGCAAAGTTAACAACAAATGCTCTCATCACATCAGCTTATGGCCTAACCAATAATGGCATAATTTTTACTGGATATCCTGTAATTGGATTTCAAAACCGTCTTCAATCTTCTGGATCATGTTTGGATAGTCTTCATAATGCAAAGATAACGGTATGTGCATGGGATTCAAGAATAAAAGGAGAGTTTTTCCACCAAACCACGTTTAGAATAAGCTTATCTCTAGTGAAAAGCTTCATTGAAGATATTCAAAAGCTAGTTGAATTAGAGCCTAAAGGTTTATGTGGAATTGAACAATACAATGGGATATTAATGCGTTATGTGAAAGCTTCAAGTGCTTATTTAGGGAGCCAAGAAGATGCTGTAGATTTTGATTTCACATATTATCGTAGCAAGGATCCAATGATGCCTAGGGTTTATGAAGATATCATAGAAGAGATTGAACAAATAGGGATATTTAAATATGGAGGGTTACCTCATTGGGGTAAGAATAGAAATTTGGCATTTGAAGGGGTTTATAAGAAGTATAAAAATGTTGGGAAATTTTTGAAGGTGAAAGAGAAGTATGATTCTCAAGGGCTTTTTTCTAGTACTTGGACAGATAAAATGCTTGGAATAAAAGAAGGTGTGGAAATATTGAAAAATGGGTGTGGTTTAGAAGGTTTGTGTATTTGTTCACAAGATAGTCATTGTAATCCAAGTAAAGGGTACTTTTGTAGACATGGGAGGGTTTACAAGGAGGCAAGGGTTTGTTCTCATGTGTGA 1767 0.3752 MFLLFLKGMSQKSFVSVLVLVFSYVVIVLSTPPEDPIKCSSSNNTTCTITNSYGMFPDRTICQASQALYPTNEKELVSMVASASRAKTKIKVATRYSHSIPKLVCPEDSNGILISTRYLNKVVKIDVVEKTITVESGVTLKDLIDEASKNGLVLPYTPYWYGLTIGGLMGTGAHGSTLWNKGSAVHDYVVEIRIVRASGSDEDGYAKVEILNENNDEDFNAAKVSLGVLGVISQVTLKLEPMFKRSITYLAKNDSDLGSEVVSFGHEHEFADITWYPSQMKTIYRFDARVPLNTSGNGLYDFLPFRPTSSLLLAGIRTQEDRDESTGDADGKCGLAKLTTNALITSAYGLTNNGIIFTGYPVIGFQNRLQSSGSCLDSLHNAKITVCAWDSRIKGEFFHQTTFRISLSLVKSFIEDIQKLVELEPKGLCGIEQYNGILMRYVKASSAYLGSQEDAVDFDFTYYRSKDPMMPRVYEDIIEEIEQIGIFKYGGLPHWGKNRNLAFEGVYKKYKNVGKFLKVKEKYDSQGLFSSTWTDKMLGIKEGVEILKNGCGLEGLCICSQDSHCNPSKGYFCRHGRVYKEARVCSHV* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5005 588 Gene3D - 400 500 - -
Psa4g5005 588 TIGRFAM pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase 32 585 IPR010030 -
Psa4g5005 588 Gene3D - 121 241 IPR016169 -
Psa4g5005 588 ProSiteProfiles PCMH-type FAD-binding domain profile. 60 242 IPR016166 GO:0071949
Psa4g5005 588 PANTHER GULONOLACTONE OXIDASE 13 588 - -
Psa4g5005 588 Pfam FAD binding domain 67 199 IPR006094 GO:0050660
Psa4g5005 588 PANTHER D-ARABINONO-1,4-LACTONE OXIDASE-LIKE PROTEIN 13 588 - -
Psa4g5005 588 Pfam D-arabinono-1,4-lactone oxidase 437 536 IPR007173 GO:0003885|GO:0016020
Psa4g5005 588 SUPERFAMILY FAD-binding/transporter-associated domain-like 58 241 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5005 Psa-Chr4 435821299 435825377 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5005 K00103 - gmx:100790483 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5005 4 435821299 435825377 Psa4g5005 4 435821299 435825377 ECH