Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4984 ATGTCCACTCTACTTCAATCCTCTTTCATTTCTTCTTCTTCCATCTCTCCGATCACTCCGCGTTTCGCTCGCATCTCCATCCGTAACGCCGCCAGATGTAATAATGCCGTAGTCTCTTTGAACTCGGCGAACGGAATTCCATATCGTTCCACTGAACTTTCAGTTACCGGTTCTACTTCCATTCCGAGTTTTCTTGTGGCGCCGAACACTCCCATCCATGATCTCGTTAACAGAAATCGTCTTCGTATATTCTCCGGTACCGCCAATCCCGCACTCGCTCAGGAAATTGCATGCTATATGGGCCTGGATCTGGGAAAGATTAAGATAAAACGTTTTGCAGATGGCGAGATATATGTCCAACTACAAGAGAGTGTCAGGGGGTGTGATGTGTTTCTCGTGCAGCCCACATGTCCTCCTGCAAATGAAAATCTTATGGAGCTTCTCGTAATGATTGATGCCTGTAGAAGAGCTTCAGCCAAGAATATTACTGCAGTCATTCCGTATTTTGGATATGCTAGAGCTGATAGAAAGACTCAAGGGCGTGAATCAATTGCTGCTAAGCTTGTAGCAAATTTAATTACAGAAGCAGGTGCAAATCGTGTTCTTGCATGTGACCTCCACTCTGGGCAGTCTATGGGCTACTTCGATATTCCTGTTGATCATGTGTATGGACAGCCTGTTATTCTTGATTACCTTGCCAGCAAGACTATTTGTTCCGATGATTTGGTAGTTGTCTCGCCAGATGTTGGTGGTGTAGCTAGAGCACGTGCTTTTGCCAAAAAGTTATCTGATGCTCCTTTAGCTATTGTTGATAAAAGGCGTCATGGGCATAATGTTGCTGAGGTGATGAACTTGATAGGTGATGTAAAGGGAAAGGTAGCAGTTATGGTAGATGACATGATTGATACTGCAGGGACCATCGCCAAAGGTGCAGCTCTGTTGCATCAAGAAGGAGCAAGAGAAGTCTATGCATGCACTACACATGCTGTTTTCAGTCCTCCTGCTATAGAGAGATTGTCAAGCGGTTTATTTCAAGAAGTTATCATAACTAATACAATTCCAGTTTCCGAGAAGAACTATTTCCCCCAATTAACTGTCTTATCAGTGGCAAACCTTCTGGGCGAGACCATATGGCGTGTCCATGATGACTGCTCAGGTGGAATTGAAACTTTTTCCAGTTTGGGCATTGATTGA 1194 0.443 MSTLLQSSFISSSSISPITPRFARISIRNAARCNNAVVSLNSANGIPYRSTELSVTGSTSIPSFLVAPNTPIHDLVNRNRLRIFSGTANPALAQEIACYMGLDLGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLVMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQEVIITNTIPVSEKNYFPQLTVLSVANLLGETIWRVHDDCSGGIETFSSLGID* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4984 397 Pfam N-terminal domain of ribose phosphate pyrophosphokinase 81 197 IPR029099 -
Psa4g4984 397 Gene3D - 84 382 IPR029057 -
Psa4g4984 397 CDD PRTases_typeI 240 352 IPR000836 -
Psa4g4984 397 Gene3D - 224 367 IPR029057 -
Psa4g4984 397 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER 61 396 IPR005946 GO:0000287|GO:0004749|GO:0009165
Psa4g4984 397 Pfam Phosphoribosyl synthetase-associated domain 282 385 IPR005946 GO:0000287|GO:0004749|GO:0009165
Psa4g4984 397 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE-RELATED 61 396 - -
Psa4g4984 397 TIGRFAM ribP_PPkin: ribose-phosphate diphosphokinase 82 384 IPR005946 GO:0000287|GO:0004749|GO:0009165
Psa4g4984 397 SUPERFAMILY PRTase-like 146 382 IPR029057 -
Psa4g4984 397 SMART Pribosyltran_N_2 81 197 - -
Psa4g4984 397 Hamap Putative ribose-phosphate pyrophosphokinase [prs]. 81 391 IPR037515 GO:0004749
Psa4g4984 397 ProSitePatterns Phosphoribosyl pyrophosphate synthase signature. 205 220 IPR000842 GO:0000287|GO:0004749|GO:0009156|GO:0044249
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4984 Psa-Chr4 432458438 432466442 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4984 K00948 - gmx:100789585 662.914