Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4982 ATGGGTTGTTGCGGTTGGAAGAAGTTGTATGGCATTGGTAGTTCACTTTCTACACCAATGTTACCACTCTCACCCTTTCGTCCTCTCTCTTCTTCTCTTCCATTCTCTTCCAATTCCCACCCTTCATCTTCTTCTTCCTCCATTTCCCAACTAGAACAAGACCAACAACAATCAAAACGAAGCTCGCAACTCGTAGCATTGGAATACGCTGACCTCAACCTCTCTAACAATTTGGAACTAGGTCATGTCAGAATCAGGCAACATGTTAATCCCCTCAGTTCTTCTTTCGCTACTCCTGCACAAGTACCAGACTGGAACCAGGTTTTTGCAGACCCTGCATTGCCACTCATGGTAGATATTGGATGTGGCAGTGGCAGGTTTCTTATGTGGCTTGCAAAAAGGACACCTAAAGTGAGAAATTATTTGGGATTGGAAATAAGGCAGAGGATGGTCAAGCGTGCTGAGTCATGGGTAAAAGACATGGCTCTAGATAACATACATTTCTTGTTTGCAAATGCCCCAATTTCTTTCAAGCAGTTGGTAGAATCATATCCCGGGCCATTGCAGTTAGTTTCAATTTTGTGTCCAGATCCTCATTTCAAGAAAAAACATCATAAAAGAAGAGTTCTGCAGAAGCCTTTGGTTGGTGCTATTGTAGACAATTTAACTCCTGGAGGACAGGTATTCATACAGTCTGATGTGGTTGAAGTGGCACTTGACATGAAAAACCAGTTTGATGAAGTTGATGCACTAAGTCACATAGATGCTTTGAACCCTGCTACATTGTGTGACAGTGAAGGATGGTTATTAAGCAACCCTATGGGGATTAGGACTGAGAGAGAGATTCATGCAGAATTCGAAGGAGCGAAAATTTATCGAAGGTTGTACGAGAAGAAGCAGATATGA 906 0.4249 MGCCGWKKLYGIGSSLSTPMLPLSPFRPLSSSLPFSSNSHPSSSSSSISQLEQDQQQSKRSSQLVALEYADLNLSNNLELGHVRIRQHVNPLSSSFATPAQVPDWNQVFADPALPLMVDIGCGSGRFLMWLAKRTPKVRNYLGLEIRQRMVKRAESWVKDMALDNIHFLFANAPISFKQLVESYPGPLQLVSILCPDPHFKKKHHKRRVLQKPLVGAIVDNLTPGGQVFIQSDVVEVALDMKNQFDEVDALSHIDALNPATLCDSEGWLLSNPMGIRTEREIHAEFEGAKIYRRLYEKKQI* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4982 301 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 37 299 IPR003358 GO:0006400|GO:0008176
Psa4g4982 301 Gene3D Vaccinia Virus protein VP39 84 300 IPR029063 -
Psa4g4982 301 ProSiteProfiles SAM-dependent methyltransferase TRMB-type domain profile. 73 298 IPR003358 GO:0006400|GO:0008176
Psa4g4982 301 CDD AdoMet_MTases 118 231 - -
Psa4g4982 301 Pfam Putative methyltransferase 115 292 IPR003358 GO:0006400|GO:0008176
Psa4g4982 301 PANTHER TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE 37 299 - -
Psa4g4982 301 TIGRFAM TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 101 256 IPR003358 GO:0006400|GO:0008176
Psa4g4982 301 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 255 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4982 Psa-Chr4 432443322 432446596 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4982 K03439 - gmx:100788255 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4982 4 432443322 432446596 Psa4g4982 4 432443322 432446596 ECH