Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4969 ATGGCACAAGTGAGCAGGAACAAGCAAGTGATTCTCACGGACTATGTTACTGGTTTTCCTAAACAATCAGACATGAACATAGTTGACAGTACCATAACTCTTAAGATTCCAGAAGGTTCCAACGATCTTGTTCTTCTCAAAAATCTCTACTTGTCTTGTGACCCTTACCTGCGGATTCTTATGACCAAGGATACTACTGCAGAACTTGGTGCTCTTACCCCTGGTTCGCCATTGACAGGTTTTGGAGTGTCTAAAGTTGTAGAATCTAGAGATCCAGATTATAAGAAAGATGATTTAGTTTGGGGTATGACTAAATGGGAAGAGTACAGCTTGATCCCTACAGCTCAAATACTTTTCAAAATTGAGCACACTGATGTTCCTCTTTCCTACTATACTGGAATTCTCGGTATGCCGGGAATGACTGCTTATGCAGGTTTCTTTGAAGTAGGAAGTCCTAAGAAAGGAGAGAATGTTTTCGTTTCAGCTGCATCTGGTGCTGTTGGACAACTTGTTGGACAATTCGCTAAATTGCACGGTTGCTATGTGGTTGGAAGTGCTGGAACTAAAGAAAAGGTGGATCTGTTGAAGAATAAATTTGGATATGATGAAGCCTTTAACTACAAAGAAGAACCAGACCTCAATGCAGTTTTGAAAAAATACTTTCCAGAAGGCATTGACATTTACTTTGAGAATGTTGGGGGAAAGACACTTGATGCTGTACTTTTGAATATGAGAGTCCACGGTCGCATACCTGTGTGTGGAATGATTTCACAGTATAATCTTGATCAACCCGAAGGTGTAACGAATTTGGCACATATCATATATAAGAGGGTTCGAGTGGAAGGTTTTGCTGTATTTGAGTACTATCATCTTTATACAAAGTTTTTGGAGTTTGTTTTGCCTCTTATAAGAGAAGGAAAGATTGCGTATGTGGAAGACGTAGCTGAGGGTCTTGAGAATGGTCCTGCTGCATTGATTGGCTTGTTTACTGGTCAAAATGTTGGTAAACAAGTTGTTGTTGTTGCTCATGAGTGA 1035 0.4 MAQVSRNKQVILTDYVTGFPKQSDMNIVDSTITLKIPEGSNDLVLLKNLYLSCDPYLRILMTKDTTAELGALTPGSPLTGFGVSKVVESRDPDYKKDDLVWGMTKWEEYSLIPTAQILFKIEHTDVPLSYYTGILGMPGMTAYAGFFEVGSPKKGENVFVSAASGAVGQLVGQFAKLHGCYVVGSAGTKEKVDLLKNKFGYDEAFNYKEEPDLNAVLKKYFPEGIDIYFENVGGKTLDAVLLNMRVHGRIPVCGMISQYNLDQPEGVTNLAHIIYKRVRVEGFAVFEYYHLYTKFLEFVLPLIREGKIAYVEDVAEGLENGPAALIGLFTGQNVGKQVVVVAHE* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4969 344 PANTHER QUINONE OXIDOREDUCTASE-LIKE PROTEIN 5 344 - -
Psa4g4969 344 CDD double_bond_reductase_like 6 341 - -
Psa4g4969 344 Pfam Zinc-binding dehydrogenase 166 299 IPR013149 -
Psa4g4969 344 Pfam N-terminal domain of oxidoreductase 8 115 IPR041694 -
Psa4g4969 344 SUPERFAMILY GroES-like 5 171 IPR011032 -
Psa4g4969 344 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 133 304 IPR036291 -
Psa4g4969 344 Gene3D - 134 310 - -
Psa4g4969 344 Gene3D - 10 339 - -
Psa4g4969 344 PANTHER PROSTAGLANDIN REDUCTASE 5 344 IPR045010 GO:0016628
Psa4g4969 344 SMART PKS_ER_names_mod 39 339 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4969 Psa-Chr4 430607069 430609406 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4969 K19825 - mtr:MTR_8g009840 607.06