Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4932 ATGGGAGAAGAAGTTAAAACAACCGACTTCGAAAAAGTGATCGAAGAATTTGAGAGAATAACAAAAAATGCTGAGAATGTTCAAAAGGAGATACTGAGAAAGATTCTGGAAGAAAATGCATCAACTGAATATTTGCAGAAATTAGGTCTGAATGGAAGAACTGATCCTGAAAGTTTCAAGGCTTGTGTTCCACTGGTCCTTTACAATGATTTGGAGCCTTATATCGAAAGAATGATTGATGGTGATTTTTCTCCTATTCTCACTGGAAAACCAATCACAATCATGTCTGCAAGTTCAGGTACTAGTCAAGGAAAACAAAAATATATTCCATGGAATGATGAAGTGTTCGAAACCTCAGTGGATATATATCAAACCTCTTTTGCCTATAGAAATAGGGAGTTTCCTATCCAAGATGGAAAGGCTTTAAACTTTATCTACAGCAGCAATTTTACACAAAGAAAAGGGGGTGTGATATATGGATCAGCCACAGGACATTTATTCAAAAGTCCTGGATTCAAGCCTTTATTGCAAGCTCTAAAATCTCCAAGCTGTAGTCCAGATGGTGTAATTTTCAGTCCTGATTTTCACCAATCACTCTACTGTCACCTCTTATGCGGACTACTTTTCAGAGAAGAAATTCACTCGATTGCATCGACATTTGGACACAGCATCGTCTTTGCTTTCAGATCATTCGAACAAGACTGGGAAGAACTTGTGAATGATATCAAAGAAGGTGTTCTTAGCAGCAGAATCACTGTTCCGTCCATTAGAGATGCTATGTCCAAATTGCTGAAACCAAATCCTGAACTAGCTGACTTGATCCACAAGAAATGCACAGGATTAAGCAATTGGTACGGATTGTTACCCGAGCTTTTTCCGAATGTTAAGTATATTCAAGGGATCATGACAGGTTCAATGGAGACTTATTTGAACAAATTGAGACACTATGCTGGAGAAGTTCCCGTGTTGACCTCCGAGTACGGCGCTTCTGAAGGATGGATTGGTTCAAATGTGAACCCTAAAGTCGCTCCTGAGTTTGCTACTTATGCCGTTCTTCCTCAAATTGCATACTTTGAATTCATTCCAATCGCGCAACTTGATGGAACACAGGTAGAACTTGATCCGGTCGGTTTAACCGATGTGAAAATCGGTGAGGAGTATGAGATCGTTATCACGAATGCTGCAGGTTTATACAGGTATAGGCTAGGAGATGTGGTGAAGGTTATGGGATTCCATAACTCAACTCCGGAAATCAAGTTTATCCGCCGGGGTGGTCTTTTGCTTACAATCAACATTGACAAGGTTACTGAGACTGATTTACAATTATCAGTAGAAACTGCATCCAAGTTTTTAGATGAGGAGAAAATAGAGCTGATTGATTACACTAGCTACATTGATTTATCCAAAGAGCCAGGACACTATGTCATATTCTGGGAAATTAGAGGTGAAGCAAGTGATGGAGTGCTTGCTGAGTGTTGTAACTGTTTGGACAAGACATTTATTGATCGCGGCTATGTTATTTCTAGAAACACCAAAGCTATTGATGATCTTGAACTCCGAATTGTTGGGAAAGGAACATTCCAGAAGCTTCTAGAGAATCATATTCAAAGAGGTGCCTCTGTGAGTCAGTTCAAGACACCTAGGTATGTTGGTCCAACAAACACCAAAGTGTTGCAAATTTTGTCGGAAAATGTTGTCAAGAGCTATGTTAGTACGGCTTACAATTGA 1728 0.3958 MGEEVKTTDFEKVIEEFERITKNAENVQKEILRKILEENASTEYLQKLGLNGRTDPESFKACVPLVLYNDLEPYIERMIDGDFSPILTGKPITIMSASSGTSQGKQKYIPWNDEVFETSVDIYQTSFAYRNREFPIQDGKALNFIYSSNFTQRKGGVIYGSATGHLFKSPGFKPLLQALKSPSCSPDGVIFSPDFHQSLYCHLLCGLLFREEIHSIASTFGHSIVFAFRSFEQDWEELVNDIKEGVLSSRITVPSIRDAMSKLLKPNPELADLIHKKCTGLSNWYGLLPELFPNVKYIQGIMTGSMETYLNKLRHYAGEVPVLTSEYGASEGWIGSNVNPKVAPEFATYAVLPQIAYFEFIPIAQLDGTQVELDPVGLTDVKIGEEYEIVITNAAGLYRYRLGDVVKVMGFHNSTPEIKFIRRGGLLLTINIDKVTETDLQLSVETASKFLDEEKIELIDYTSYIDLSKEPGHYVIFWEIRGEASDGVLAECCNCLDKTFIDRGYVISRNTKAIDDLELRIVGKGTFQKLLENHIQRGASVSQFKTPRYVGPTNTKVLQILSENVVKSYVSTAYN* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4932 575 Pfam GH3 auxin-responsive promoter 16 550 IPR004993 -
Psa4g4932 575 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 575 - -
Psa4g4932 575 Coils Coil 10 30 - -
Psa4g4932 575 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 575 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4932 Psa-Chr4 427179241 427181629 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4932 6 572 EF-hand Containing Proteins AT1G23160 39.347 2.60e-136 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4932 K14506 - gmx:100806209 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4932 4 427179241 427181629 Psa4g4932 4 427179241 427181629 ECH