Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4923 ATGAAGGATTTGAATTCCGATCTGTTTGACCCTGTTACGGTCATGGAATCCGAATGGGCTCACGGTGGTGCTTCTAATTCCGATGCCGATTTCGGTTTTGCTTTCAATGATAGTAATTTTTCCGATAGGATTCTTCGGATCGAGATCATGGCTGACCCCGTTGATCCTCAGCCGGATTCCGAAACTTGTACCACCATCGCCGATTGGGCGAGGCACCGTAAGAGGAGACGTGAGGATATTAAGAAAGATAACGTTGGAGATCTGCCGGATGAGCAAATTTTGAATGGGAACCAACCTGATATGGATGATTGTGTCGCTTCGGAAAATCAAGATGAAGAGGTTGTTGCGATGGTTGAAGAATCCCCTTCTGGCGATGAAGCTGTAAATAGCAATGATGATTTAAACCTGGGCATGGATTACGCCGAACCTGCGGTTGTTAGATTTAAAACCCTACATATCAGTTCTCCTATCTTGGCTGCGAAAAGCCCTTTTTTCTATAAGCTTTTCTCGAACGGGATGAGGGAATCAGAGCTGAGACATGTCACCCTCAGAATTAATGCCTCTGAAGAAGCTGCTCTGATGGAGCTGCTGAATTTTATGTATAGTAATACCTTGAGCATTAAGACTGCACCTGGTTTGCTTGATGTGTTGATGGCCGCGGATAAATTTGAAGTTGCTTCATGCATGCGATATTGTAGCCGGTTGTTGCGTAATATTGCCATGACTCCTGAATCTGCATTGCTTTACCTGGAGCTGCCTTCTAGTGTCCTAATGGCTGAGGCAGTTCAACCATTGACTGATGCTGCAAAGCAGTATCTTGCTAGCCGATACAAGGATATAACCAAGTACCAGGAAGAGGTTATGAGCTTACCCCTAGTTGGAGTAGAGGCAATATTATCTAGTGATGATCTCCAGGTTGCGTCAGAAGATGCTGTTTATGACTTTGTGTTGAAGTGGGCTAGACAACAGTATAGCAATCTGGAAGAAAGACGACTAGTCCTAGGTTCACGGCTTGCAAGATTAATTCGCTTCCCTTATATGACCTGCCGAAAGCTTAAGAAGGTCTTAACTTGTAGTGACTTTGAACATGATGTTTCATCCAAGCTTGTACTTGAGGCCCTATTTTTCAAGGCAGAGGTTCCACATCGTCAACGGTCGCTGGCAGCAGAAGAGCCTACATGCTCAAGCCGTCGTTTCTTGGAGAGGGCATACAAATATCGTCCGGTCAAGGTGGTTGAATTTGAACTTCCTCGCCAACAGTGTGTGGTGTACTTGGATCTAAAGCGCGATGAGTGTAACAACTTGTTCCCATCCGGCCGGGTTTATTCTCAGGCATTTCACTTGGGTGGTCAAGGGTTTTTTCTATCAGCACATTGTAACATGGATCAACAAAGCTCTTTCCATTGTTTTGGTCTGTTTTTGGGAATGCAGGAAAAGGGGTCAGTGAGCTTCACCGTGGACTACGAATTTGCGGCTCGGTCAAGACCAACAGAGGAATTCGTTAGCAAATACAAAGGCAATTACACATTCACAGGTGGCAAGGCCGTTGGCTACAGAAACTTGTTTGCGATCCCATGGACTTCATTCATGGCTGAGGACTGTCTTTACTTCATCAACGGCGTTCTGCACCTTAGAGCCGAGCTCACCATCAGACACTGA 1659 0.4557 MKDLNSDLFDPVTVMESEWAHGGASNSDADFGFAFNDSNFSDRILRIEIMADPVDPQPDSETCTTIADWARHRKRRREDIKKDNVGDLPDEQILNGNQPDMDDCVASENQDEEVVAMVEESPSGDEAVNSNDDLNLGMDYAEPAVVRFKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTLRINASEEAALMELLNFMYSNTLSIKTAPGLLDVLMAADKFEVASCMRYCSRLLRNIAMTPESALLYLELPSSVLMAEAVQPLTDAAKQYLASRYKDITKYQEEVMSLPLVGVEAILSSDDLQVASEDAVYDFVLKWARQQYSNLEERRLVLGSRLARLIRFPYMTCRKLKKVLTCSDFEHDVSSKLVLEALFFKAEVPHRQRSLAAEEPTCSSRRFLERAYKYRPVKVVEFELPRQQCVVYLDLKRDECNNLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFTVDYEFAARSRPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMAEDCLYFINGVLHLRAELTIRH* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4923 552 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN POB1 6 552 - -
Psa4g4923 552 ProSiteProfiles BTB domain profile. 132 209 IPR000210 GO:0005515
Psa4g4923 552 SMART BTB_4 112 240 IPR000210 GO:0005515
Psa4g4923 552 Gene3D - 272 378 - -
Psa4g4923 552 PANTHER OS02G0260700 PROTEIN 6 552 IPR045890 -
Psa4g4923 552 Pfam BTB And C-terminal Kelch 263 355 IPR011705 -
Psa4g4923 552 SUPERFAMILY TRAF domain-like 439 550 - -
Psa4g4923 552 SUPERFAMILY POZ domain 149 237 IPR011333 -
Psa4g4923 552 Pfam BTB/POZ domain 149 237 IPR000210 GO:0005515
Psa4g4923 552 CDD BTB_POZ_ZBTB_KLHL-like 145 223 - -
Psa4g4923 552 Gene3D Potassium Channel Kv1.1; Chain A 144 260 IPR011333 -
Psa4g4923 552 SMART BACK_2 255 357 IPR011705 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4923 Psa-Chr4 426117237 426121805 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4923 - - gmx:100817612 936.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4923 4 426117237 426121805 Psa4g4923 4 426117237 426121805 ECH