Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4913 ATGGCTGGAGAAACTGCATGGATCAGCCACTATGATGATGAAACAAGAAAGGAGACTAGGGACATTGATTTGTTATTGCAATCTAGCGAGGAAGTTGATAAAGAAGAAACTGTTATTTCGTTGGACGTAATGCCTGACGAGTTATTGGAGCGTATCCTAGCCTATCTCCCGGTTGCAAGCATTTTCAGAGCGAGGAGTGTGTGTAAAAGATGGCATGAGATTGTTACTTCTGAAAGGTTTCTATGGAATCCTTCCAACTCGCCACCGCAGAAGCCTTGGTATTTTATGTTTACTGGCTCCGAAGAACCAACTGGCTGTGTTTATGATCCGAATCTTCGGAATTGGTATTGCATTGAGCTTCCCTTCATTGGAAATTCTAATTGGTTCATTTCATCTTCACGTGGCTTAGTTTGCTTCATGGATAACGGCAGCAGAAGCCAATTATGCGTGTGCAATCCTATTGCCAAAAGCTGTAGGGTGCTTCCGGAGCCTCCGGGGTTGAGATTTTCTGATTATGTCACGTTAGCAATGTCGGTCGACAAGGAATCCTATGGTTATACTGTGGGAATTGTGAAATCAAAGCAAGTTCCTGAAAACTTTTTTCAATGGGATATCTCGATTCATATTTACAAATCGGAGGAGGAGACTTGGGCGACGCCGCTAACCGAGGTTTTGATCGGGTGGAGAGGTGCAGACGAGAGTGTTATATGCAATGGTGTACTGTATTTCGTAGTTCAGTCTACCGGCGGCGTTCCATCTGAAAACCGTCACGCATTAGTTGCATATAATCTCTCCGGCCGAACTTCTCAAACTAGCTTAAGAAAGAGCTTTATTCAAGTACCGTGTTCTCTATCATGCGCCCGGCTTATGAATATGAAGGAGAAGCTTGTAATGGTGGGAGGAATTGGAAAACCTGACCGACCGGACATAATCAAAGGAATCGGTATTTGGGTTCTTCATGACAGGAAATGGGAGGAGATTGTCCGAATGCCACACAAATACTTCCAAGGCTTCGGAGAGTTTGACGAGGTGTTCGGTAGCCGAGGCATAGATGATCTAATATATATTCAAAGCTATGGATCTCCTGCACTTCTCACATTCGACATGAACATTAAACAATGGAAATGGTCACAGAAATGCCCCGTTTCAAAGAGATTCCCTCTACAGGTTTTCTCTGGTTTTTGCTTTGAGCCTAGGCTTGACATTGCTCCATAG 1215 0.4403 MAGETAWISHYDDETRKETRDIDLLLQSSEEVDKEETVISLDVMPDELLERILAYLPVASIFRARSVCKRWHEIVTSERFLWNPSNSPPQKPWYFMFTGSEEPTGCVYDPNLRNWYCIELPFIGNSNWFISSSRGLVCFMDNGSRSQLCVCNPIAKSCRVLPEPPGLRFSDYVTLAMSVDKESYGYTVGIVKSKQVPENFFQWDISIHIYKSEEETWATPLTEVLIGWRGADESVICNGVLYFVVQSTGGVPSENRHALVAYNLSGRTSQTSLRKSFIQVPCSLSCARLMNMKEKLVMVGGIGKPDRPDIIKGIGIWVLHDRKWEEIVRMPHKYFQGFGEFDEVFGSRGIDDLIYIQSYGSPALLTFDMNIKQWKWSQKCPVSKRFPLQVFSGFCFEPRLDIAP* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4913 404 PANTHER F-BOX FAMILY PROTEIN 2 403 IPR045048 -
Psa4g4913 404 Gene3D - 34 84 - -
Psa4g4913 404 TIGRFAM F_box_assoc_1: F-box protein interaction domain 133 337 IPR017451 -
Psa4g4913 404 ProSiteProfiles F-box domain profile. 38 85 IPR001810 GO:0005515
Psa4g4913 404 SUPERFAMILY F-box domain 40 141 IPR036047 GO:0005515
Psa4g4913 404 Pfam F-box-like 44 83 IPR001810 GO:0005515
Psa4g4913 404 PANTHER OS02G0260200 PROTEIN 2 403 - -
Psa4g4913 404 SMART fbox_2 44 84 IPR001810 GO:0005515
Psa4g4913 404 SUPERFAMILY Galactose oxidase, central domain 105 382 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4913 Psa-Chr4 425106677 425110141 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4913 - - gmx:100817678 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4913 4 425106677 425110141 Psa4g4913 4 425106677 425110141 ECH