Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4878 ATGGCTCAAGAGAATGTGAAAAGATCACCTTCTCAAATAAAATACACCATGGTTAAATCTATTATAAGATTATTTGTGTTTTTAGTGTTTCTGGGTTTACTTTTCATTTTCATTATGATGCCTGTAACAACTTTCAAACAAAAATGGATTCCGAAAATTCAAGCAAAGACTAATTCCACTTATTTTGGTGTTCAAGGTTTTAGGATTCTTATATATACTTTTCCACTCTTGTTAATAGCCACTTTGGGATGTGTTTATATTCACATAGCCAAAAAATCAAATCAAATTGACAATGGCAAGAAACATGAAACAACCATATGGAAACGTCCAATGCTTGTAAAAGGTCCTCTTGGAATTGTTTCAATCACAGAAATAGCTTTTTTGCTTATGTTCATTGCTCTTCTTGTTTGGACCTTAGCAACTTATTTGCATAATGACTTTTCATCAATTGCATCATCACCAGAGGAAGAACATGGCCCTAAAGTGTGGCAAGAGAAATTGGAGAGTGTGGGATTAAGGTTAGGACTTGTCGGAAACATATGTTTAGTGTTGTTGTTTTTTCCTGTGACACGTGGCACGTCCGTGCTACCAATGTTTGGGCTCACTTCTGAAGGTTCCATTAAGTACCATATTTGGCTTGGGCACGTGCTCATGACGATTTTCACACTTCATGGAGTTTGTTATATTATCTATTGGATATCTACTAATCAAATTTCACAGATGCTAAAATGGAACAAAATTGGAGTATCAAATTTAGCTGGAGAGATATCTTTGCTTGCTGGTTTGTTCTTATGGGTTGCAACCATTCCAAAACTTAGAAGAAAATTTTTTGAACTCTTTTTCTATACTCATAACCTATACATTATCTTCGTCATCTTCTTCGTCTTTCATGTTGGCATTTCTTTTGCCAACATTATGCTCCCCGGTTTCTATCTCTTCATGGTCGATCGATACCTTCGGTTCCTCCAATCCAGGCGCGGAGTTCGTTTAGTTTCGGCTCGTGTTTTGCCGTGTGAAGCCGTTGAACTCAACTTCTCTAAGGGTCATGAGTTGAGTTATAATCCGACGAGTGTGATGTTCATAAATGTACCAAGCATATCAAAGTTGCAATGGCATCCGTTTACCATTACTTCTAATAGTAACTTGGAGCAAGATAAGCTAAGTGTTGTCATTAAAAGTGAAGGAACTTGGACAAAAAAACTCTACAAGTTGCTTTCAAATCCTTCGCCGATCGATCGCCTTCAAATATCCGTCGAAGGTCCTTATGGACCCGCTTCAACCAATTACCTAAGGCATGATACACTTGTGATGATAAGTGGAGGAAGTGGCATCACACCATTTATCTCAATCATTAGAGAGCTAATATATCTTAGCACTACATTCAAATGCAAAACACCAAACATTGTTCTAATTTGTTCATTCAAGAACACTTCATCTCTTTCAATGCTAGATTTGATCCTACCGATTTCTAGCACACCACAAGACATTTCTGATATGCAACTTCAAATTGAGGCCTACATCACAAGAGACAAAGAGTTTAAATCAGATATTCCAATTCATCCTCAAACTCTATGGTTCAAGCCGAATCCAACCGATGCACCAATACACGCTATATTAGGTCCAAACGGTTGGATTTGGCTTGGTGCCATAATCTCGTCCTCTTTCATTATCTTCCTTATTATAATCGGGATCATTACCCGTTACTATATTTTCCCTATTGATCATAACACGAATAAGATATTTTCGTATCCTTTAAGGTCATTCATTCACATGCTAGCAATATGTGTGTCGATAGTTGTTGTTGCTAGTGTCGCGGTGCTTTCAAACAAGAAACAAAATGCTAGGGAAGCTAAACAGATTCAGAACATGGAAGGGTCGACACCGACAGTGTCGCCAAATTCAATGATATATAATGCAGATAGAGAATTGGAAAGCTTTCCATATCAGTCGCTTGTTGAAACTACCAATGTGCACTACGGTGCAAGACCTGACTTGAGCCGACTTCTATTAGAAATCAAAGGGTCAAGTGTGGGAGTTTTTGCATCAGGACCTAAGCAACTGAGACAGAATGTTGCGACCATTTGCTCATCTGGTTTGGTTGAAAATCTGCATTTCGAATCAATCAGTTTCACCTGGTGA 2139 0.3801 MAQENVKRSPSQIKYTMVKSIIRLFVFLVFLGLLFIFIMMPVTTFKQKWIPKIQAKTNSTYFGVQGFRILIYTFPLLLIATLGCVYIHIAKKSNQIDNGKKHETTIWKRPMLVKGPLGIVSITEIAFLLMFIALLVWTLATYLHNDFSSIASSPEEEHGPKVWQEKLESVGLRLGLVGNICLVLLFFPVTRGTSVLPMFGLTSEGSIKYHIWLGHVLMTIFTLHGVCYIIYWISTNQISQMLKWNKIGVSNLAGEISLLAGLFLWVATIPKLRRKFFELFFYTHNLYIIFVIFFVFHVGISFANIMLPGFYLFMVDRYLRFLQSRRGVRLVSARVLPCEAVELNFSKGHELSYNPTSVMFINVPSISKLQWHPFTITSNSNLEQDKLSVVIKSEGTWTKKLYKLLSNPSPIDRLQISVEGPYGPASTNYLRHDTLVMISGGSGITPFISIIRELIYLSTTFKCKTPNIVLICSFKNTSSLSMLDLILPISSTPQDISDMQLQIEAYITRDKEFKSDIPIHPQTLWFKPNPTDAPIHAILGPNGWIWLGAIISSSFIIFLIIIGIITRYYIFPIDHNTNKIFSYPLRSFIHMLAICVSIVVVASVAVLSNKKQNAREAKQIQNMEGSTPTVSPNSMIYNADRELESFPYQSLVETTNVHYGARPDLSRLLLEIKGSSVGVFASGPKQLRQNVATICSSGLVENLHFESISFTW* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4878 712 CDD NOX_Duox_like_FAD_NADP 330 509 - -
Psa4g4878 712 PANTHER NADPH OXIDASE 19 711 - -
Psa4g4878 712 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 323 428 IPR017927 GO:0016491
Psa4g4878 712 Pfam Ferric reductase like transmembrane component 174 295 IPR013130 -
Psa4g4878 712 Gene3D - 416 533 IPR039261 -
Psa4g4878 712 Pfam Ferric reductase NAD binding domain 432 696 IPR013121 GO:0016491
Psa4g4878 712 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 416 489 IPR039261 -
Psa4g4878 712 PANTHER FERRIC REDUCTION OXIDASE 2 19 711 - -
Psa4g4878 712 SFLD Ferric Reductase Domain 40 712 - -
Psa4g4878 712 SFLD Ferric reductase subgroup (FRE) 22 712 - -
Psa4g4878 712 Pfam FAD-binding domain 327 426 IPR013112 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4878 Psa-Chr4 422039990 422044431 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4878 17 712 Miscellaneous Gene Families AT1G01580 57.528 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4878 K00521 - gmx:100790114 1046.96