Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4812 ATGGCTAGTAGATTGCATAAACTTTATAGAAGTTGGGAAGATAACCCTGATATTGGTTTTGTCATGGTAAAGGGCAGTGGCCGGGCATTTGCAGCTGGTGGAGATATTGTTGCGCTTTATCGTTTATTAAAAGAAGGGAACATGGAAGCCTGCAAAGAGTTTTTTAGAACAATATATAGTTTTATATACCTGCTAGGTACATATTTGAAGCCACATGTAGCTCTTCTGAATGGCATTACCATGGGTGGTGGGGCAGGAATTTCAATTCCTGGGACATTCCGAGTTGCAACAGACAAAACTGTTTTTGCTACCCCTGAAGTTCTTATTGGTTTCCATCCCGATGCTGCAGCGTCTTTTTACCTTTCACGTCTACCTGGTCACTTAGGAGAGTACTTGGCTCTGACAGGGGAGAAGCTCAACGGAGTAGAGATGGTTGCCTGTGGGCTTGCTACACATTATTCACTACTTGCAAGGCTTCCACTAATTGAAGAACAGCTGGGGAAATTGGTTACTGATGACCCATCTGTCATAGAAACCACTTTAGAACAGTATGGTGATCTTGTATATCCAGACAGCAGTAGCGTACTACAAAGGCTTGAAATTGTAGATAAATGCTTTTGCCATGACACAGTTGAAGAGATTGTTGATGCCGTGGAAGTTGCGGCAAGTGAAACAAAAGAACCATGGTGCATTTCTACTCTAAATAGACTTAAAGAAGCTTCTCCATTGAGCTTGAAGGTTTCCTTGAGATCTATACGAGAAGGTAGATTTCAGACCCTTGATCAGTGCTTGTTGCGCGAGTACCGAATGACTTTACAAGCAATATCTAAACAAATATCCAATGACTTCTGCGAGGTATAA 861 0.4193 MASRLHKLYRSWEDNPDIGFVMVKGSGRAFAAGGDIVALYRLLKEGNMEACKEFFRTIYSFIYLLGTYLKPHVALLNGITMGGGAGISIPGTFRVATDKTVFATPEVLIGFHPDAAASFYLSRLPGHLGEYLALTGEKLNGVEMVACGLATHYSLLARLPLIEEQLGKLVTDDPSVIETTLEQYGDLVYPDSSSVLQRLEIVDKCFCHDTVEEIVDAVEVAASETKEPWCISTLNRLKEASPLSLKVSLRSIREGRFQTLDQCLLREYRMTLQAISKQISNDFCEV* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4812 286 Gene3D - 1 286 - -
Psa4g4812 286 SUPERFAMILY ClpP/crotonase 1 275 IPR029045 -
Psa4g4812 286 CDD crotonase-like 1 152 - -
Psa4g4812 286 Pfam Enoyl-CoA hydratase/isomerase 1 285 IPR045004 -
Psa4g4812 286 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 1 285 IPR032259 GO:0003860
Psa4g4812 286 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 1, MITOCHONDRIAL 1 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4812 Psa-Chr4 419269852 419287342 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4812 1 285 Acyl Lipid Metabolism Gene Families AT4G31810 65.965 1.25e-144 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4812 K05605 - gmx:100801676 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4812 4 419269852 419287342 Psa4g4812 4 419269852 419287342 ECH