Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4800 ATGGACATTAAAGAACCAGTTAAGAACAAAATTCCTTGGGATGGGACTCTTTCTCTAAATGATTTTACCCTTTCTGCTTTTACATTTTCTGACAAGTGGAAATTGTTTAATCCTTTCTTTCCTCCATGGTTGTGGACTACTTGTCCAAAACATCATTTGGGTTCTTCTCATAAGATGGAAGGATACTTATCACTCAGGAATGTGTGCGTTGTCAAATCAAGTGAGGAAGAAGAGAGCAATAGGAGTCTTACAAGGAAAGAGAGCAACATCTCACAAACAGAAGAGCCTTTTGATGATGCAACTTTAGTTTGTCCAGAGGATGAAGTAAACCACTATGATTTTCACATTATATACAGTCCTTCCTATAGAGTTCCAGTGCTGTATTTCCGTTCATATCATAGTGATGGACAACCTTTGCCCTTCAGTGAAATTGAAAAAGACCTTCCGGGTCATTCTGCAGAGTTGCTTCTAGAATCCAAATGGACATTTATAACTCAAGAGGAGCACCCCTATTTGAATAGGCCATGGTACAAGCTACACCCTTGTGGGACTAGTGAATGGATGAAACTACTCCTATGTGGTGGTGATACATCTTTGAATAACAACTTAGTTCAACAATATTTAGTTTCTTGGTTCTCTGTTGTTGGGCAAGTTGTTGGTCTTAAAACTCCTTTGGGAATGCTGGATAATATAGTTTCAAATAATTCTCAGATAAAATGA 720 0.3792 MDIKEPVKNKIPWDGTLSLNDFTLSAFTFSDKWKLFNPFFPPWLWTTCPKHHLGSSHKMEGYLSLRNVCVVKSSEEEESNRSLTRKESNISQTEEPFDDATLVCPEDEVNHYDFHIIYSPSYRVPVLYFRSYHSDGQPLPFSEIEKDLPGHSAELLLESKWTFITQEEHPYLNRPWYKLHPCGTSEWMKLLLCGGDTSLNNNLVQQYLVSWFSVVGQVVGLKTPLGMLDNIVSNNSQIK* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4800 239 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 10 227 IPR007135 GO:0019787
Psa4g4800 239 Pfam Autophagocytosis associated protein, active-site domain 29 224 IPR007135 GO:0019787
Psa4g4800 239 PANTHER AUTOPHAGY-RELATED 10, ISOFORM B 10 227 - -
Psa4g4800 239 Gene3D - 57 222 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4800 K17888 - gmx:100808589 365.925