Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4799 ATGGCGCTACAGTTTGTGAAACAGCACCACTTACGAGGTTTACAGAGCGAGACAACCTTAACTTTCCTTTCATTGTTACGAAATCTGAAGCTCCCAGGAACAGTGAGATGGGTCAGTGGTGAATTACCAGTTAAGTCTTCCTTTAGAAGCTATGCCACTGCAAAATCCGAGAGGATTATACCAATCAAAAAGAAAAAGAGGCTGGATGAAGTATGCCTTGAAAGGTATCAGCAATATAGTCGATCCATCATCCAGTCGTGGATTCTGCAAGGAAAAGTATATGTGAACGGGAAGGTGATTAATAAAGCCGGTACCCCTGTTTCTGAAAAATCTGTTGTCGAGATAATGGCTGAAATTCCGAAATATGTATGTAGAGCTGGACATAAGCTGGAAGGTGCCATTGAACAGCTGGGTGTCGATGTTGCTGGTAAAGTTGCTCTTGATTCTGGGCTGTCTACTGGAGGATTTACCGATTGCTTACTTCAGTATGGCGCATCACATGTTTATGGGGTTGATGTTGGTTACGGACAGGTAGCAGAAAAAATTCGAACAGATGAACGCGTGTCTATTATAGAGCGGACAAATTTAAGATATCTCAAAGAACTCCCACAAAATGTTGATTTGGTGACCCTAGACCTCTCTTTCATCTCTATTCTTACGGTCATGCCTGCCGTGGTAAATGTAATGAAGGAAGATGCTGCATTAGTGACATTGGTTAAACCGCAATTTGAAGCTCGGAGATCTCAAGTGGGAAAGGGAGGGATAGTGAAAGATCCTCTAGTCCATCAAGAGGTTCTTGAGAAGATTACAAAGGGAGTTGAAAGCTTTGGTTTCTGCAGCAAAGGTTGGATTGAGTCTCCTCTCAAAGGTGCTGAGGGTAATACAGAATTTCTAGTTCACTTCAGCAGAATCACCAAAGGTTCTAATAAACATGAAGAAATTAAAGAAGAATCTAAGCTCGATGATGCATTTCTTCAATCTTCAGAGAAGAAGTAG 996 0.4177 MALQFVKQHHLRGLQSETTLTFLSLLRNLKLPGTVRWVSGELPVKSSFRSYATAKSERIIPIKKKKRLDEVCLERYQQYSRSIIQSWILQGKVYVNGKVINKAGTPVSEKSVVEIMAEIPKYVCRAGHKLEGAIEQLGVDVAGKVALDSGLSTGGFTDCLLQYGASHVYGVDVGYGQVAEKIRTDERVSIIERTNLRYLKELPQNVDLVTLDLSFISILTVMPAVVNVMKEDAALVTLVKPQFEARRSQVGKGGIVKDPLVHQEVLEKITKGVESFGFCSKGWIESPLKGAEGNTEFLVHFSRITKGSNKHEEIKEESKLDDAFLQSSEKK* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4799 331 PANTHER BACTERIAL HEMOLYSIN-LIKE PROTEIN 62 307 IPR004538 GO:0003723
Psa4g4799 331 SMART s4_6 66 131 IPR002942 GO:0003723
Psa4g4799 331 PANTHER BACTERIAL HEMOLYSIN-LIKE PROTEIN 62 307 - -
Psa4g4799 331 Pfam FtsJ-like methyltransferase 122 301 IPR002877 GO:0008168|GO:0032259
Psa4g4799 331 TIGRFAM tly: TlyA family rRNA methyltransferase/putative hemolysin 67 296 IPR004538 GO:0003723
Psa4g4799 331 Gene3D Vaccinia Virus protein VP39 125 331 IPR029063 -
Psa4g4799 331 SUPERFAMILY Alpha-L RNA-binding motif 65 118 - -
Psa4g4799 331 Pfam S4 domain 67 112 IPR002942 GO:0003723
Psa4g4799 331 CDD S4 66 115 - -
Psa4g4799 331 MobiDBLite consensus disorder prediction 312 331 - -
Psa4g4799 331 ProSiteProfiles S4 RNA-binding domain profile. 66 126 - -
Psa4g4799 331 Gene3D - 55 122 IPR036986 GO:0003723
Psa4g4799 331 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 303 IPR029063 -
Psa4g4799 331 CDD AdoMet_MTases 147 226 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4799 K06442 - gmx:100781303 499.59