Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4798 ATGATCATTCAAGCTTTTCACGCTTCTTCTTCGTCTTGTTACTTCAATTCCCACCTTCAATCTTGTTCCACCAAGCGTTTCCCTTCAAAAAAGTCTCTGAAGCTCAACTGTAGTACAGCTTCAGATGGAGACAAAAATGATTATCTTCTCGATGCTCCTGTTTCTGTTGGCGATGGTTTCTCTTTCAGTGGAGGAAAATATTCAGATGGACCAAATCCAAGTGATGAATGGTTTAAGCAAGGGAAAATGGTTAAAGCCTATTCAATTCCTGGAACGGGTGAAAAGGCAAAAGATCCAATTTTCGGGCTAACAATGGGGAATAGTTCTCAAGCCAGCGGCGATCGTTTCAGATGGTTTTGTGTTGAAAGCGGAAATGCTGATAATCCGTCTGTCATATTAGTTCATGGCTTCCCTTCGCAGGCATATTCGTATCGCAAAGTTCTCCCGGTACTCTCAAAGGACTATCATGCTGTAACATTTGATTGGCTAGGATTTGGGTTTTCTGATAAGCCTCAACCCAAATATGGGTTTGACTACACCCTTGACGAATATGTGTCATCATTGGAATCACTTATTGATGAACTTGGTGTTACTAAAGTCTCACTTGTTGTCCAAGGATATTTTTCACCAGTTGTAGTGAAGTACGCCAGCAATCACAAAGAAAAGATTAACAACTTAATACTCATTAATCCACCGTTAACAGCTCAACATGCCAAGCTTCCACCAACATTGTCCATATTCAGCAACTTTCTCTTAGGTGAAATATTTTCACAGGATCCATTGAGGGCCAGTGACAAAGCTCTGACAAGCTCTGGACCTTACAAAATGAAAGAAGAAGATGCAATGGTCTATAGAAGACCCTATCTCATATCTGGATCCTCAGGCTTTGCATTGAATGCAATTACCAGGACCATGAAGAAAGACCTCAAGAGGTATGTAGAGGATATGCAGAGAATACTTACCGACAAAAGTTGGAATGTTCGAACAACGATATGTTGGGGTCAGAGAGATCGCTGGTTAAGCTACGATGGAGTAGAAGACTTCTGCAAAAGTTCCAATCATAAACTTGTTGAAGTTCCAAGGGCTGGACATCACGCACAGGAAGATTGCGGAGAAGAACTCGGACAACTTATTAATGGAATATTAAGAAAAAAGAACTAA 1161 0.4083 MIIQAFHASSSSCYFNSHLQSCSTKRFPSKKSLKLNCSTASDGDKNDYLLDAPVSVGDGFSFSGGKYSDGPNPSDEWFKQGKMVKAYSIPGTGEKAKDPIFGLTMGNSSQASGDRFRWFCVESGNADNPSVILVHGFPSQAYSYRKVLPVLSKDYHAVTFDWLGFGFSDKPQPKYGFDYTLDEYVSSLESLIDELGVTKVSLVVQGYFSPVVVKYASNHKEKINNLILINPPLTAQHAKLPPTLSIFSNFLLGEIFSQDPLRASDKALTSSGPYKMKEEDAMVYRRPYLISGSSGFALNAITRTMKKDLKRYVEDMQRILTDKSWNVRTTICWGQRDRWLSYDGVEDFCKSSNHKLVEVPRAGHHAQEDCGEELGQLINGILRKKN* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4798 386 SUPERFAMILY alpha/beta-Hydrolases 113 383 IPR029058 -
Psa4g4798 386 Pfam alpha/beta hydrolase fold 129 368 IPR000073 -
Psa4g4798 386 PRINTS Alpha/beta hydrolase fold signature 154 169 IPR000073 -
Psa4g4798 386 PRINTS Alpha/beta hydrolase fold signature 216 229 IPR000073 -
Psa4g4798 386 PRINTS Alpha/beta hydrolase fold signature 329 343 IPR000073 -
Psa4g4798 386 PANTHER EPOXIDE HYDROLASE 39 384 - -
Psa4g4798 386 Coils Coil 384 386 - -
Psa4g4798 386 Gene3D alpha/beta hydrolase 104 385 IPR029058 -
Psa4g4798 386 PANTHER HYDROLASE-LIKE 39 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4798 Psa-Chr4 418901041 418903673 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4798 118 384 Acyl Lipid Metabolism Gene Families AT3G51000 24.595 7.66e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4798 - - gmx:100809126 654.055