Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4780 ATGGAAGGAGGGAAAGAAGAAAAGAAAAATGAGAAGGGAAAAGATAAGATTGAAGGAAAGGTAGAAAAGAAAAAAGATGATATTGAATTGATCATTGCTATTTACAAAGTAAACTTGCATTGTCAAGAATGTGGGAATAAAATCAAGAAGCATCTCTTAACTACTCAAGGGGTACAAAGTGTGGAAATGGATATTGAGAAAGGAGAGATCAAGGCAAAAGGGAAATTGGACCCTTTGAAAGTGTTGAAGATTATAGAGAAGAAGAGTAATAAGAAAGTTGAGTTAATATCACCAAAAGTGAAGCCTAAAGAGATTACTATTAGTAAGCCAAAGGAGATTAAGGATGCAATTGTCCGAACTATATCTGTGAAAGTTCACATGCATTGTGACAAATGTGAGGCTGATCTAAAGCATAGATTAATCAAACACAAAGGCATTTTCAATGTTAAAACCGATATGAAAGCTCAAAATCTAACAGTTGAAGGGACCATTGAAGTGGAGAAATTGTTATCATTTTTGAAAAAAATAATGCGTAAAAATGCACAAGTTATTTCCATAAAAGAAGACAAAAAGGAAGAGAAGAAAGAAGAGAAAAAGGAAGAAAAGAAAGACAAGGGCAAGGCTAATGGTGAAACAAGCAAAGTAATAGAAATTCATCATCATGGGAATACAAGAGATGATACTAAAATAAATGACAATATTAATGTTCCTTATATTATTCACTATGTTTATGCACCACAGCTCTTTAGTGATGAGAATCCTAATTCTTGTTCTATTTCTTAA 783 0.3231 MEGGKEEKKNEKGKDKIEGKVEKKKDDIELIIAIYKVNLHCQECGNKIKKHLLTTQGVQSVEMDIEKGEIKAKGKLDPLKVLKIIEKKSNKKVELISPKVKPKEITISKPKEIKDAIVRTISVKVHMHCDKCEADLKHRLIKHKGIFNVKTDMKAQNLTVEGTIEVEKLLSFLKKIMRKNAQVISIKEDKKEEKKEEKKEEKKDKGKANGETSKVIEIHHHGNTRDDTKINDNINVPYIIHYVYAPQLFSDENPNSCSIS* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4780 260 MobiDBLite consensus disorder prediction 188 228 - -
Psa4g4780 260 Gene3D - 110 181 - -
Psa4g4780 260 SUPERFAMILY HMA, heavy metal-associated domain 119 176 IPR036163 GO:0046872
Psa4g4780 260 Pfam Heavy-metal-associated domain 123 178 IPR006121 GO:0046872
Psa4g4780 260 Pfam Heavy-metal-associated domain 36 91 IPR006121 GO:0046872
Psa4g4780 260 Coils Coil 183 211 - -
Psa4g4780 260 MobiDBLite consensus disorder prediction 188 229 - -
Psa4g4780 260 Gene3D - 32 103 - -
Psa4g4780 260 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 4 23 259 - -
Psa4g4780 260 CDD HMA 120 167 IPR006121 GO:0046872
Psa4g4780 260 CDD HMA 39 87 IPR006121 GO:0046872
Psa4g4780 260 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 23 259 IPR044577 GO:0046872
Psa4g4780 260 SUPERFAMILY HMA, heavy metal-associated domain 33 88 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4780 Psa-Chr4 418578481 418580746 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4780 - - gmx:100783418 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4780 4 418578481 418580746 Psa4g4780 4 418578481 418580746 ECH