Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4776 ATGACTTCAAATTCTAGTCCTACTAATAGCTATCCAATCAAAACGGTGGTCGTTTTGGTTCAAGAGAACCGTTCATTTGACCACATGTTGGGTTGGATGAGGTCCTTAAATCCAAAAATCAACGGTGTTACCGGTTCAGAGTCAAATCCAATTTCAACGTCCAATCCCAACTCAAAACGAGTTCAATTTAGCGACCGGTCAATATATGTTGACCCAGACCCCGGACACTCGATCCAAGACATTTACGAGCAAATTTTTGGAGAACCATGGAGCGAAGCCTCAGCAGCAAAGAAATTGCCACCAATGATGGAGGGCTTCGCTCAAAATGCGACGAGACAAGAGAAACCAAAAGAGGCAACAACATTGACAATGACGGAGGCGGTTATGAATGGGTTTAAACCCGATTTGGTTCCGGTTTACAAAGAGTTAGTTAAAGAGTTTGCAATTTGTGACAATTGGTTTGCTTCGGTTCCTGCATCGACCCAACCAAACCGACTTTATGTACATTCCGCCACATCACACGGGTTAACTAGCAATGACCCTTATAAGCTAATTGGAGGGTTACCTCAAAAGACAATATTTGATTCTTTGGATGAAAATGGGTTCACTTTTGGGATCTACTATCAACAGCCACCATCCACTCTTTTTTACAGGAATCTTAGGCAGCTGAAATACATAGATAACTTTCATGAATTCGGATTAACATTCAAGAATCATTGTGAAGAAGGGAAATTACCAAACTACGTGGTGATAGAACAAAGATTTTTCGACTTGTTCTCAATACCTGCAAATGATGATCACCCATCTCATGATGTTGGAGAAGGACAAAAACTTGTAAAAGAAGTGTATGAAGCACTAAGAGACAGTCCACAATGGAATGAAATGTTGTTTGTAATTACTTACGACGAACATGGAGGATTTTACGATCACATGCCAACGCCAGTGGATGGAGTCCCTAGTCCAGATGACATTGTTGGTCCTGAGCCATTCAAGTTTAAGTTTGATAGGCTTGGTGTTAGGGTTCCAACCATCTTTATTTCTCCATGGGTTGAGCCAGGAAAAGTGTTGCATGAACCTTGTGGACCTTTTCCAACATCACAATATGAGCATTCATCTATACCAGCAACTGTGAAGAAGATATTTAATCTCCCTAATTTTTTGACAAAGAGGGATGCATGGGCTGGAACATTTGAGAGCCTTTTAACTCTAACCCGCCCGCGAACCGATTGTCCAGAAAAATTACCCGACCCGATTAAACTACGAGAGACGGCTGCTAAAGAACGAGCCAAGTTGAGTGAATTTCAGGAAGAATTGGTATTACTGGCAGCAACTCTAAATGGAGATCATAGAAAGAGTATATACCCGGACAAGTTAGTCGAGAACATGTGTGTTTCTGAAGCAGTTATATATGTTGAGGACGCATTCAATACGTTCTTGAATGAGTGTGAAAAAGCAAAGAAAAATGGAGCTGATGGATCTGAAATTGTTGATTGTGCCAATTCATGTAGTACACAATCCAATTCCAAAAACTTGTTTCACAAGTTGTTGTCTTGTGTAACCTGTGATCGATGA 1572 0.4084 MTSNSSPTNSYPIKTVVVLVQENRSFDHMLGWMRSLNPKINGVTGSESNPISTSNPNSKRVQFSDRSIYVDPDPGHSIQDIYEQIFGEPWSEASAAKKLPPMMEGFAQNATRQEKPKEATTLTMTEAVMNGFKPDLVPVYKELVKEFAICDNWFASVPASTQPNRLYVHSATSHGLTSNDPYKLIGGLPQKTIFDSLDENGFTFGIYYQQPPSTLFYRNLRQLKYIDNFHEFGLTFKNHCEEGKLPNYVVIEQRFFDLFSIPANDDHPSHDVGEGQKLVKEVYEALRDSPQWNEMLFVITYDEHGGFYDHMPTPVDGVPSPDDIVGPEPFKFKFDRLGVRVPTIFISPWVEPGKVLHEPCGPFPTSQYEHSSIPATVKKIFNLPNFLTKRDAWAGTFESLLTLTRPRTDCPEKLPDPIKLRETAAKERAKLSEFQEELVLLAATLNGDHRKSIYPDKLVENMCVSEAVIYVEDAFNTFLNECEKAKKNGADGSEIVDCANSCSTQSNSKNLFHKLLSCVTCDR* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4776 523 Pfam Phosphoesterase family 13 384 IPR007312 GO:0016788
Psa4g4776 523 Gene3D Alkaline Phosphatase, subunit A 3 185 IPR017850 -
Psa4g4776 523 Gene3D Alkaline Phosphatase, subunit A 243 430 IPR017850 -
Psa4g4776 523 PANTHER NON-SPECIFIC PHOSPHOLIPASE C3 1 508 - -
Psa4g4776 523 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 1 508 IPR007312 GO:0016788
Psa4g4776 523 SUPERFAMILY Alkaline phosphatase-like 149 360 IPR017850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4776 Psa-Chr4 418509328 418511749 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4776 8 518 Acyl Lipid Metabolism Gene Families AT3G03530 63.551 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4776 K01114 - gmx:100805391 896.73