Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4765 ATGGAAGTCCCAAAAAAGCCTTCTTCTGGTATCTCCAAGTGGCAATGCTCTTCAGCAAAAAGCAAAATTGTGAATAACTTCAATCCTATATGCCAAGCTGTCCAAAAACTAACTCTCAAAGGAAAGTTTGTGATCACCTTGAATCAAAAGATATCAATACCTGGAAAATTCATTTCTGTTCAGATTTATAGCGGCACAGAAGTGGATCCTAATACCGGTAAAGGGTGGTTGAGTGAGAAAGCATATTTTAAAGAACGCAGAAAAAACCAGAAATATCAACATGATGATAATGACGATACACAAACCAAGATTAAGACATATAAGATTAAACTACATGTTGATGCACATTTCGGAACTCCAAGAGCTTTTGTGATTCAAAACAAACACAACAAGAAATTTTATCTTCTTTCTGCATCTATTGAGACTTGTACCAATAGAATCATTCACTTTGATTGCAATTCTTGGATTTATCCAATCAAGAAGACTAAATTTGATAGACTTTTCTTCTCAAATAGATGCTATGTTCCGAGTCAAACACCCAGAGCTTTATTGGAACTAAGAAATGATGAGCTTGATAAATTGAGAGGTAATGGAATGGGAGAAAGAAAAGAATGGGATAGAATCTATGACTATGACTACTACAACGATCTCGGCGATGTTGACAAAGGTTCGGAGCATTTTAGACCTGTCTTGGGAGGTTCAAGGTTATATCCATATCCACGTCGAGTTAGAACCGGTCGTAAAAATAGTACATCAGGTACTTCAAGGTCACAAGCAACAAGTTTTGACATATATGTACCTTCAGATGAGATATTTAGTCCTAAAAAATTGAAGGAGCTCAAGTCAAACTCTATACATGCCATAGTACAATTGCTACCTTCAAAGACAGAATCGTTACCTCAACAAAGTTCGAGAAGCGTTCAATCATTTGAAGAGATACTTAACATGCTCTCTAGGAATAGAAACCAAACAATAGAGGGATGGATCAGAGACAACTTAAAGAAATTGGTGCCAAATGAGGACTTAAAGGAAATAACTCATGCAATCAAGGAAAACCATATGCATGATCCTATCCCTCAAAACATATATGAAAATGAATGGGCTTGGAATGATGACATGGAGTTTGGACGACAAATGCTTGCAGGAACACACCCTATCAGAATCCAATGCTTGATGACATTTCCACCTCAAAACAAATTTGGAGTACAAAGTTCAATAAAACAATCAACCATAGAACAGATGCTTGAAGGATGGACACTTCATCAGGCTTTGGAACAAGGAAGAATATTCATGTTGGATCACCATGACTATCTCATGCCATATTTGAACAGAATAAATGCAAATGGAGTATGTGCTTATGCATCAAGGACACTTCTATTCTTAAGAAGTGATGGCATGCTTAAGCCACTGACCATAGAACTCAGCTTGCCAGGATCATCTCTAGCTCTTGAAATCCATAGAATTTTTCTTCCATCAAAGCAAGGGACACAAGCAGCACTTTGGCAACTTGCCAAAGCTCATGTTTTAGCTAATGATGCTTTTTACCATCTACTAGTTAGCCATTGGTTATACACACATGCAGTTGTTGAACCATTTATTCTTGCTACCAAAAGAAGACTAAGCGTCATGCATCCAATCCATAAGTTATTGAATCCTCATTTCAAAGACATCATGCACATAAATGCCTTGACTAGACATATACTTATTAACTCTGGTGGAATTCTTGAGAAAATATTATTTCCTGGTGAAACCTGTATGCAAATAACATGTGATCTCTATAAAGAGTGGAAATTTACCGAACAAGGACTTCCAGCTGATCTTCTCAAAAGGGGTATGGCTGTAGAAAACCTAGATGAGAACAACCCAAATGGAATTCAACTTCTCATGTTGGACTATCCCTATGCCATTGATGGACTTGAAATATGGGCTGCCATAAAATCGTGGGTCAATGACTTCTGCTCAATTTTCTACAAAGACAACGAGGCCATCGAAGCTGATGTTGAACTTCAAGCATGGTGGTCAGAGATTCGATCTATTGGCCACGGCGACAACCACAATGAGACGCGGTGGTACCAAATGACAACACTCTCAAACCTTGTGGAAGCATTAACAACTCTCATATGGATTGCTTCGGCGCGCCATGCAGTTATAAACCACCAAAAACATTCACATAATGATAACTCTCCCACACTATGCAGGAAGTTTATTCCAGTAGAAGGAACGGTTGAATTTGGCGAGTTCCTTAAGGATCCTGATAAGTTCTTCACCAAGATGTTACCTGATAGGTTTGAGACGAGTCTTGGTTTAGCATTGGTAGATTTGCTCTCAAAAAATACTTACGATGAAATGTACTTGTTGAAATGCCAACCGTCACATGGTTGGATAGACAATGAAATTGTCCAGAATAGATTTGCTGAGTTCAAAGAAGAACTAAAGGAGATTCAGATAAGGATCTTGCAAAGGAATAAAGATCCTAAGCTCAAGAATAGACGCGTCCCTGCAAAAATTGATCATAACATTGTGTATCCTAAGATGCCTAGTTCTGGATCAAGAAGATGGAATCATGGAAAGAGGAGTGTCTTATAA 2586 0.3805 MEVPKKPSSGISKWQCSSAKSKIVNNFNPICQAVQKLTLKGKFVITLNQKISIPGKFISVQIYSGTEVDPNTGKGWLSEKAYFKERRKNQKYQHDDNDDTQTKIKTYKIKLHVDAHFGTPRAFVIQNKHNKKFYLLSASIETCTNRIIHFDCNSWIYPIKKTKFDRLFFSNRCYVPSQTPRALLELRNDELDKLRGNGMGERKEWDRIYDYDYYNDLGDVDKGSEHFRPVLGGSRLYPYPRRVRTGRKNSTSGTSRSQATSFDIYVPSDEIFSPKKLKELKSNSIHAIVQLLPSKTESLPQQSSRSVQSFEEILNMLSRNRNQTIEGWIRDNLKKLVPNEDLKEITHAIKENHMHDPIPQNIYENEWAWNDDMEFGRQMLAGTHPIRIQCLMTFPPQNKFGVQSSIKQSTIEQMLEGWTLHQALEQGRIFMLDHHDYLMPYLNRINANGVCAYASRTLLFLRSDGMLKPLTIELSLPGSSLALEIHRIFLPSKQGTQAALWQLAKAHVLANDAFYHLLVSHWLYTHAVVEPFILATKRRLSVMHPIHKLLNPHFKDIMHINALTRHILINSGGILEKILFPGETCMQITCDLYKEWKFTEQGLPADLLKRGMAVENLDENNPNGIQLLMLDYPYAIDGLEIWAAIKSWVNDFCSIFYKDNEAIEADVELQAWWSEIRSIGHGDNHNETRWYQMTTLSNLVEALTTLIWIASARHAVINHQKHSHNDNSPTLCRKFIPVEGTVEFGEFLKDPDKFFTKMLPDRFETSLGLALVDLLSKNTYDEMYLLKCQPSHGWIDNEIVQNRFAEFKEELKEIQIRILQRNKDPKLKNRRVPAKIDHNIVYPKMPSSGSRRWNHGKRSVL* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4765 861 Coils Coil 797 817 - -
Psa4g4765 861 Gene3D PLAT/LH2 domain 24 192 - -
Psa4g4765 861 PRINTS Lipoxygenase signature 498 515 IPR013819 GO:0016702|GO:0046872
Psa4g4765 861 PRINTS Lipoxygenase signature 516 533 IPR013819 GO:0016702|GO:0046872
Psa4g4765 861 PRINTS Lipoxygenase signature 536 556 IPR013819 GO:0016702|GO:0046872
Psa4g4765 861 ProSiteProfiles PLAT domain profile. 39 170 IPR001024 GO:0005515
Psa4g4765 861 ProSitePatterns Lipoxygenases iron-binding region signature 2. 543 553 IPR020834 GO:0016702|GO:0046872
Psa4g4765 861 Pfam Lipoxygenase 183 843 IPR013819 GO:0016702|GO:0046872
Psa4g4765 861 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 173 851 IPR013819 GO:0016702|GO:0046872
Psa4g4765 861 SMART LH2_4 39 171 IPR001024 GO:0005515
Psa4g4765 861 Gene3D - 193 292 - -
Psa4g4765 861 Gene3D - 295 385 IPR027433 -
Psa4g4765 861 Gene3D - 514 853 - -
Psa4g4765 861 PANTHER LIPOXYGENASE 100 845 IPR000907 GO:0016702|GO:0046872
Psa4g4765 861 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 47 174 IPR036392 GO:0005515
Psa4g4765 861 PRINTS Plant lipoxygenase signature 140 158 IPR001246 GO:0016491
Psa4g4765 861 PRINTS Plant lipoxygenase signature 166 187 IPR001246 GO:0016491
Psa4g4765 861 PRINTS Plant lipoxygenase signature 205 221 IPR001246 GO:0016491
Psa4g4765 861 PRINTS Plant lipoxygenase signature 238 257 IPR001246 GO:0016491
Psa4g4765 861 PRINTS Plant lipoxygenase signature 354 370 IPR001246 GO:0016491
Psa4g4765 861 PRINTS Plant lipoxygenase signature 453 477 IPR001246 GO:0016491
Psa4g4765 861 PRINTS Plant lipoxygenase signature 772 786 IPR001246 GO:0016491
Psa4g4765 861 Gene3D - 386 512 - -
Psa4g4765 861 PANTHER LIPOXYGENASE 100 845 - -
Psa4g4765 861 SUPERFAMILY Lipoxigenase 175 845 IPR036226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4765 Psa-Chr4 418343377 418346949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4765 37 843 Acyl Lipid Metabolism Gene Families AT3G22400 42.099 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4765 K00454 - gmx:100797946 1311.59