LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa4g4759	ATGGTTGGGGTTGAAGGACGTTACATTTCAATCAAAACACTTCGTGGAAAGAAGGATGAAATTATTAATTTCCTGGTGGACCCATCTATGGATTTGACACTGCAGGAGTTGGCAAAACGGATTTTCCCTCTTTGTAGGAGCTTTCTGTTGATCAACCAATTTGTGGAATCAAGGTCTCAGTTCCAGAATGGGCTAGTTAATCATGCCTTTTCTGCTGCCCTTAGGGAATTCCTTCTCGATTACCAGGCCTTCGTGGCACAACTTGAGCACCAATTCCGGCTTGGGAGACTTTCCCTCCAAGGATTGTGGTTCTACTGTCAGCCCATGTTGAGGTCAATGCAGGCATTGTCTACTGTCATACAGAAGGCTTCAGCCAATAATTTTTCTGGTTCTGCCGTTCTTAACTTATTGCAGAGCCAGGCAAAGGCTATGGCTGGAGACAATGCAGTAAGGTTGTTGCTGGAGAAAATGACACAATGTGCAAGTAGAGCCTACATGAGCATACTCGAAAGATGGGTCTATGAAGGAGTAATAGATGATCCTTATGGTGAATTTTTCATTGCAGAAGACAAATCTCTTCAAAAGGAGAGTCTTACTAAAGATTATGATGCTAAGTATTGGCGACAGCGTTACAGCCTCAAAGATGGAATTCCTAGTTTCCTTGCAAATACTGCGGAAACAATTTTGACCACAGGAAAGTATCTAAATGTTCTGAGAGAATGTGGACACAATGTTCAGGTCCCTCCATCAGAAAACTCAAAACTAATGAGCTTTGGCTCAAATCATCATTATCTTGAATGTATTAAGGCTGCTTATAATTTCGCAAGTGGCGAACTCGTGAATCTCATTAAGGAAAAGTATGATCTAACAGGAAAATTGCGGTCTATAAAACACTACCTTCTTCTTGATCAGGGGGATTTCTTAGTGCATTTTATGGATATTGCTCGAGATGAGCTGGCCAAAAAACCTGATGAAGTATCAGTTGAGAAACTGCAGTCTCTTCTAGACCTTGCTCTGCGTACAACAGCAGCTTCTGTAGATCCTTATCATGAAGGCTTAACCTGTATTGTGGAAAGATCATCTTTGCTTAAAAGGTTGGGCACATTTAATGTCACTGAAGTTAGCCAGAGAGATTCTAGTAATAATGATATTCTGGAGGAGCCTGTTAGCATCACCGGCCTTGAAACATTTTCACTAAGTTATAAGGTGCACTGGCCATTGTCTATAGTATTATCACGGAAAGCCCTTACAAATTACCAGTTAATTTTTCGATTTCTTTTCCACTGCAAACATGTTGACCGTCAGCTATGTGGAGCATGGCAAACACATCAAGGAGTTCGCGCTCTTAATACACGTGGAACTGCTATCTCCAGATCATCTCTTCTGTGCCGAAGTATGCTTAAATTCATCAATAGTCTTTTGCACTATCTTACATTTGAGGTTATTGAACCCAATTGGCATATGATGTATACTAGACTTCAGTCAGCAAATAGCATAGACGAGGTTATTCAACATCATGATCTTTTCCTCAATAAGTGTCTGAGAGAGTGTTTACTACTTTTACCTGAGTTGCTGAAGAAGGTGGAGAGGCTTAAATCCATGTGCTTACAATATGCAGCCGCAACTCAGTGGCTTATATCATCTTCTATCGTATTACATAGTCCAGATGAACCGAAAGCTGATTCAATCAAAACTAAACAACTGAAGTCAACCACCAGAAATGCAGCGGTCACTGATTCTATTCTCAAATTTGAGAAGGATTTTGATTCCGAGCTTCAGAGTCTTGGATCAATCTTGAGTAGTAGCTCCCAGGCAGAGCCATATTTGACCCATCTTGCAAAATGGATTCTTGGTGTCAAACTCGAACATAATGGTTTGTGA	1881	0.4083	MVGVEGRYISIKTLRGKKDEIINFLVDPSMDLTLQELAKRIFPLCRSFLLINQFVESRSQFQNGLVNHAFSAALREFLLDYQAFVAQLEHQFRLGRLSLQGLWFYCQPMLRSMQALSTVIQKASANNFSGSAVLNLLQSQAKAMAGDNAVRLLLEKMTQCASRAYMSILERWVYEGVIDDPYGEFFIAEDKSLQKESLTKDYDAKYWRQRYSLKDGIPSFLANTAETILTTGKYLNVLRECGHNVQVPPSENSKLMSFGSNHHYLECIKAAYNFASGELVNLIKEKYDLTGKLRSIKHYLLLDQGDFLVHFMDIARDELAKKPDEVSVEKLQSLLDLALRTTAASVDPYHEGLTCIVERSSLLKRLGTFNVTEVSQRDSSNNDILEEPVSITGLETFSLSYKVHWPLSIVLSRKALTNYQLIFRFLFHCKHVDRQLCGAWQTHQGVRALNTRGTAISRSSLLCRSMLKFINSLLHYLTFEVIEPNWHMMYTRLQSANSIDEVIQHHDLFLNKCLRECLLLLPELLKKVERLKSMCLQYAAATQWLISSSIVLHSPDEPKADSIKTKQLKSTTRNAAVTDSILKFEKDFDSELQSLGSILSSSSQAEPYLTHLAKWILGVKLEHNGL*	627

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa4g4759	626	PANTHER	GAMMA-TUBULIN COMPLEX COMPONENT	108	618	-	-
	Psa4g4759	626	Pfam	Gamma tubulin complex component C-terminal	289	613	IPR040457	GO:0043015
	Psa4g4759	626	PANTHER	GAMMA TUBULIN COMPLEX PROTEIN	108	618	IPR007259	GO:0000226\|GO:0000922\|GO:0005815\|GO:0007020\|GO:0043015
	Psa4g4759	626	Gene3D	-	289	621	IPR042241	-
	Psa4g4759	626	Pfam	Gamma tubulin complex component N-terminal	2	286	IPR041470	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa4g4759	Psa-Chr4	418214519	418221545	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa4g4759	K16569		-	gmx:100795585	1050.81