Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4755 ATGTTTTCTTCATCATCATCCAGACCCCAATGGATCTACGACGTGTTCATCAATTTCAGGGGAAAAGACACTCGTAGCAATTTCGTCTCTCATCTCTATGCTGCACTATCAAATGCTGGAATCAACACTTTTCTCGACGATGAAAATCTTCAAAAGGGAAAGGAACTTGGACCAGAGTTACTGCGAGCAATCGATGGTTCTCAGATATTCATCGTTGTTTTCTCGGAAAACTATGTCCACTCTAGTTGGTGTCTTGATGAACTCCAACAAATCATGAAATTTGACACAGATAAGAATCGAGTTATTATGCCTGTATTTCACGGTGGTATTACCCCTTCTTATATACGTGAATATGCTAAGCAAACTTTCGGAGAAGCTCTCACTAGAAGTAGCGACAGAAATAATTTGGAAAATCCACCTAGGAGAACACTCAACAATTCTTCGAAATGGGATATGAGTAATTTCAGTCAAAGGAGTGATGTGAAGGAAAATCCACGAAAGAAAGCACTCATTGATGCTTCGAATTTGGCTGGTTGGGATATGAATAATTACAGTAAGGAAAGCAGTGTTGTGAAGGAGGTTGTTGGCCAAGTTTTGAAAAAAGTAGACAAAAAATGCTTACCTATCCCAGATTTTCCAGTTGGGCTAGAATCCCGTCTTACTGAACTGAGAACATCACATGCATCACAAGTTTCGGATCTTTCCTTGAGATCTGTTTTGATTGGAATTGGAAGTTGCCACATTGTCATCGATACTCTTGAGAAGATCTTATCACAGAGATTGGCAACCAATTGTAGCAATTCTTTCTTTCCGGAAGACAATTATCCTTCTTGGTTAGTCTATAGAGGTGAAGGAGCTTCGGTAAGATTTCAAGTTCCCGAGGATACTGATTCTGTAATGAAGGGCATAACTCTGTGTGTTCTTCATTCATCATCATCTGAAAAACTAAGATCGGAATGTTTGACTAGTGTCTTGATTATTAATTACACAAAATTCACTTTCCATATTTACAAAGGAGACACAGTAATATCGTTTAACGATGAAGATTGGCAAAGCGTGAAATCAAATTTAGGAGTTGGTGACAATGTGGAGATATTTGTAGCTATTGGGCACATATTGACTGTTAAGGAGACAGCTGTGTATCTAATATATGGAATGGAAGTTGAGCCAACAATTCAAGTGGAAGCACAACCATCACCTGATGTGAAAGCAGAACCATCACTTTTTGTCAAGAATAAACCATTACCGAAGACAAAAAGAATTTCTTTTACAAGACTTGCAAAAAGAGTGAGAAAATGTTTATGCTGA 1308 0.3815 MFSSSSSRPQWIYDVFINFRGKDTRSNFVSHLYAALSNAGINTFLDDENLQKGKELGPELLRAIDGSQIFIVVFSENYVHSSWCLDELQQIMKFDTDKNRVIMPVFHGGITPSYIREYAKQTFGEALTRSSDRNNLENPPRRTLNNSSKWDMSNFSQRSDVKENPRKKALIDASNLAGWDMNNYSKESSVVKEVVGQVLKKVDKKCLPIPDFPVGLESRLTELRTSHASQVSDLSLRSVLIGIGSCHIVIDTLEKILSQRLATNCSNSFFPEDNYPSWLVYRGEGASVRFQVPEDTDSVMKGITLCVLHSSSSEKLRSECLTSVLIINYTKFTFHIYKGDTVISFNDEDWQSVKSNLGVGDNVEIFVAIGHILTVKETAVYLIYGMEVEPTIQVEAQPSPDVKAEPSLFVKNKPLPKTKRISFTRLAKRVRKCLC* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4755 435 MobiDBLite consensus disorder prediction 129 149 - -
Psa4g4755 435 Gene3D - 7 209 IPR035897 -
Psa4g4755 435 ProSiteProfiles TIR domain profile. 11 169 IPR000157 GO:0007165
Psa4g4755 435 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 16 221 - -
Psa4g4755 435 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 220 384 - -
Psa4g4755 435 SMART till_3 12 176 IPR000157 GO:0007165
Psa4g4755 435 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 221 IPR044974 GO:0006952
Psa4g4755 435 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 220 384 IPR044974 GO:0006952
Psa4g4755 435 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 118 IPR035897 -
Psa4g4755 435 Pfam TIR domain 13 133 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4755 Psa-Chr4 418160536 418166627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4755 7 138 Miscellaneous Gene Families AT1G57670 38.806 5.86e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4755 - - mtr:MTR_8g011710 267.7