Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4747 ATGTTTTCATCTTCATCATCATCCTCAACTCCTCGATGGATACACGACGTCTTCATCAATTTCCGAGGCGAAGATACTCGCAAAACCTTCGTTTCACATCTCTACGCCGTCCTCTCAAACGCCGGAATCAACACTTTCCTCGACAACGAAAAGCTCGAAAAAGGAGAGGACATTAGAAACGAACTGGTTGAATCGATTGGAGTGTCTCATATATCAATTGTCGTTTTCTCGAAAAACTACGCCGAATCTAGTTGGTGTTTAAACGAATTGGATAAAATCATGGAGTGTCGTAGAACTCAAGGTCAAGTCGTTTTGCCTGTGTTTTATGATGTTGATCCTTCGGTTGTTCGGCATCAGAAAGGTGAGTTTGGTAAAGCTTTGGAAGTTAGTGCTAAACGTAGATACATCATTGAGGAAGTGATGCAGAAAGTTTTGACTAGATGGAGAAAGGTGTTGACTGAAGCTTCTAATTTATCTGGCTGGGAAGGAAGCGCTTTCAGGAGTGACCGTGAATTAGTGAAGAAAATTGTTGAGGCCATTTTGCCAAAATTAGACAACACATCCTTGCCGATTACTGATTTTCCAGTTGGATTAGAATTCCATGTGAAACAAGTGGTTCAGTTGATTAAGAAACAACCGGGCGATGTTTCTATGGGAACAGAAACTGTTGAGGCATTGATTTTGAACTTGCAAAGAACAGGAAGAGTTAGCTATAGCACTGATGCTTTTCAAGACATGCAGAAACTGAGACTTTTACAACTTGATCGTGTTGACCTCACTGGAGATTTTGGTCATCTTTCCAAATAA 807 0.4077 MFSSSSSSSTPRWIHDVFINFRGEDTRKTFVSHLYAVLSNAGINTFLDNEKLEKGEDIRNELVESIGVSHISIVVFSKNYAESSWCLNELDKIMECRRTQGQVVLPVFYDVDPSVVRHQKGEFGKALEVSAKRRYIIEEVMQKVLTRWRKVLTEASNLSGWEGSAFRSDRELVKKIVEAILPKLDNTSLPITDFPVGLEFHVKQVVQLIKKQPGDVSMGTETVEALILNLQRTGRVSYSTDAFQDMQKLRLLQLDRVDLTGDFGHLSK* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4747 268 PANTHER TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN 4 167 - -
Psa4g4747 268 PANTHER TMV RESISTANCE PROTEIN N-LIKE 4 167 - -
Psa4g4747 268 ProSiteProfiles TIR domain profile. 13 184 IPR000157 GO:0007165
Psa4g4747 268 Pfam TIR domain 15 188 IPR000157 GO:0007165
Psa4g4747 268 SMART till_3 14 158 IPR000157 GO:0007165
Psa4g4747 268 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 161 IPR035897 -
Psa4g4747 268 Gene3D - 9 192 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4747 Psa-Chr4 417935053 417959916 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4747 17 199 Miscellaneous Gene Families AT4G19920 35.519 1.01e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4747 - - cam:101511388 257.299