Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4718 ATGTTATCTCACTCTCACTATGTCTTGACTATAACCTCCCTCGCAGTTAGGTACGAAGCACGTCTTGATGATGGAACTCTTGTAGCATCAACATCTGAGGATGGCGTGGAGTTCACTGTCAGGGATGGTCATTTTTGTCTTGGATTGTCTAAGGCTGTTAGGACCATGAACATGGGAGACAGAGTACTCTTGACTGTCAACCCACAATATGGATTTGGTGAGAAAGGCAAGCCAGCTCACGGCGATCAAGCTTCAGTTCCGCCTAATGCAATATTGCATATTAATCTTCAGTTGGTTTTTGTGAAGCCTGGTTTTGAAGTAAATGTTGAAAAGAAGATTGTCAAGGAAGGACAAGGATATGAGTGTCCAAATGAGGGAGCTCTTGTGAAATGTAAATGA 399 0.4286 MLSHSHYVLTITSLAVRYEARLDDGTLVASTSEDGVEFTVRDGHFCLGLSKAVRTMNMGDRVLLTVNPQYGFGEKGKPAHGDQASVPPNAILHINLQLVFVKPGFEVNVEKKIVKEGQGYECPNEGALVKCK* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4718 132 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 14 98 IPR001179 GO:0003755
Psa4g4718 132 SUPERFAMILY FKBP-like 15 103 - -
Psa4g4718 132 Gene3D - 7 100 IPR046357 GO:0003755
Psa4g4718 132 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 15 101 - -
Psa4g4718 132 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 11 102 IPR001179 GO:0003755
Psa4g4718 132 PANTHER PEPTIDYLPROLYL ISOMERASE 15 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4718 Psa-Chr4 416535912 416536475 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4718 11 132 Calmodulin-binding Proteins AT3G25230 59.524 4.01e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4718 K09571 - gmx:100803189 155.992