Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g4714 ATGGTTATGGCTTTGATTTCTCTATTTATCTTCTCCTTATTCATCACATCAAGTGGAGAAATTTCAGGACAACCTGGAGTAAACTATGGAGAACTAGGTAACAATCTTCCAACACCAACAACCTCAGTGTCTCTAATCAAAAACCTCAAAGCCAAACGCGTCAAAATCTACGATGCAAACCCCGAAATCCTCAAAGCACTCGAAAACACTGGATTCCAAGTATCAATCATGCTACCAAATCAACTCATTACCAACATATCCTCAAACCAAACACTCTCAAACCAATGGATCCAATCCAACCTCGTACCGTTTTACCCTAAAACACTCATTCGTTATCTTCTCGTCGGTAACGAACTCATTTCCTCAACATCAAACCAAACATGGCCTCACATTGTACCAGCCATGCACCGAATCAAACACTCCTTAACTATATTTGGTTTGCATAAAATCAAAGTCGGAACCACTTCAGCAATGGATGTTTTACAAACATCATTTCCACCTTCAAATGGAACTTTTAGAGATGACATTGCATTTAGTGTTATTAAACCCATGTTGGAGTTCTTACATGTTACAAACTCTTTTTTCTTCTTGGATGTTTATCCGTTTTTTGCTTGGACTTCGGATCCTATTAATATTAACTTGAATTATGCTCTTTTTGAATCGGATAACATCACGGTTACGGATCCGAATACGGGTTTGGTTTATACTAATTTATTTGATCAAATGGTGGATGCGGTTTATTTTGCAATGGAACGGCTTGGATTTCCTAGTATTCGGATCTTTATTGCTGAAACGGGTTGGCCTAATGGTGGCGACTTGGATCAAATTGGTGCGAATATTCACAATGCTGCTACATATAATAGAAACATTGTGAAGAAAGTTACGAAAAAGCCTCCTACAGGGACACCAGCTCGACCGGGTTCGGTTCTACCAACATTTATATTTGCTTTGTTTAATGAAAATTTGAAACCAGGTTTAGGGACAGAGCGTCACTTCGGGTTATTATACCCGAATGGATCAAGTATTTATGAGATCGACCTTTCTGGCAAGACTCTAGAGTCGGAGTTTAAGACATTGCCACCAGCAGAGGATTATAAAGGGAAGGCGTGGTGTGTGGTGGCGGAGGGAGCAAATGAGACGGCGGTGGTGGAGGCGTTGTCATACGCTTGCTCACAAGGAAACCAAACATGTGATTCGGTTCAACCCGGAAAACCTTGTTTCAAACCCGATTCAGTGGTGGATCGTGCTAGTTATGCGTTTAGTTCTTATTGGGCACAGTTTAGACATGTGGGTGGAACTTGTAATTTCAACGGTCTTGCCACCCAAATTGCAAAGGATCCAAGTTATGGATCTTGCAAGTACCCAAGTGTGACCCTTTGA 1380 0.4094 MVMALISLFIFSLFITSSGEISGQPGVNYGELGNNLPTPTTSVSLIKNLKAKRVKIYDANPEILKALENTGFQVSIMLPNQLITNISSNQTLSNQWIQSNLVPFYPKTLIRYLLVGNELISSTSNQTWPHIVPAMHRIKHSLTIFGLHKIKVGTTSAMDVLQTSFPPSNGTFRDDIAFSVIKPMLEFLHVTNSFFFLDVYPFFAWTSDPININLNYALFESDNITVTDPNTGLVYTNLFDQMVDAVYFAMERLGFPSIRIFIAETGWPNGGDLDQIGANIHNAATYNRNIVKKVTKKPPTGTPARPGSVLPTFIFALFNENLKPGLGTERHFGLLYPNGSSIYEIDLSGKTLESEFKTLPPAEDYKGKAWCVVAEGANETAVVEALSYACSQGNQTCDSVQPGKPCFKPDSVVDRASYAFSSYWAQFRHVGGTCNFNGLATQIAKDPSYGSCKYPSVTL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g4714 459 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 13 451 IPR044965 GO:0004553|GO:0005975
Psa4g4714 459 SUPERFAMILY (Trans)glycosidases 26 346 IPR017853 -
Psa4g4714 459 PANTHER BNAC03G35190D PROTEIN 13 451 - -
Psa4g4714 459 SMART X8_cls 369 454 IPR012946 -
Psa4g4714 459 Pfam Glycosyl hydrolases family 17 26 346 IPR000490 GO:0004553|GO:0005975
Psa4g4714 459 Gene3D Glycosidases 25 354 - -
Psa4g4714 459 Gene3D - 365 457 - -
Psa4g4714 459 Pfam X8 domain 370 441 IPR012946 -
Psa4g4714 459 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g4714 Psa-Chr4 416497717 416499479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g4714 21 459 Glycoside Hydrolase AT3G23770 54.831 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g4714 - - ccaj:109805358 719.153