LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa4g4698	ATGGGATCAAAGAAGGATTTTGCGGTGAATGTTTTGTCTCAATGGTTGAAGAAAAAATCAATGAAAGTGAAGATCTCTTTAGGGATATTGCTTGCTTTATGTGCATTGTTGGTTCTAAATTTTACTATCAGAGATCCAAGATATTTCTTCAGAGCCTCTGCAACAATCCATATTGTTGGTCTTATTACTCTCATATACAAACTCTTTGCTCACAAAACGTGCTCTGGTTTATCACTTAAGAGTCAAGAGCTCACAGCTGTATTTCTAACAACAAGAATTGGTTGTAGTGTCTACTTGCATGCTAACGTACACACTGTGTTGGACGTAATACTTCTTTTGTTGACATTGTTGGTTATTTGGTTGATACGATTCAAGCTGAAGTCTTCCTATATCAAGGAGATTGACAACATGTGGTTATCATTTTTGGTGATGTTTTCTATAATTGCGGGAATAGTAATACATCCATATACAAGTTATACATTAGTTGGAGTTATATGGGCATTCTCTACGTATTTGGAATCTATTTCAATACTTCCTCAACTTCGTTATATGCAAAATGCAAAGATGGTTGAAACATTCACGGGATATTATGTATTTGCACTTGGTGTCTCAAGATTCTTTTCCCTGGCTTTTTGGATTGTTCATACTTATGAGACTCGAGGGCAATACCTATTCTTTTGGGGCCATGGCTATTTTTGGATGCTTTCGGTTTTTATATCAGAGATAGTTCAGTCTTTTATCTTGGCAGACTTTTGTTACTATTATATAAAGAGCTTCATGAAAGGGAAACTTTTGAAGAAGATGCCGGTTTAA	813	0.3542	MGSKKDFAVNVLSQWLKKKSMKVKISLGILLALCALLVLNFTIRDPRYFFRASATIHIVGLITLIYKLFAHKTCSGLSLKSQELTAVFLTTRIGCSVYLHANVHTVLDVILLLLTLLVIWLIRFKLKSSYIKEIDNMWLSFLVMFSIIAGIVIHPYTSYTLVGVIWAFSTYLESISILPQLRYMQNAKMVETFTGYYVFALGVSRFFSLAFWIVHTYETRGQYLFFWGHGYFWMLSVFISEIVQSFILADFCYYYIKSFMKGKLLKKMPV*	271

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa4g4698	270	PANTHER	ER LUMEN PROTEIN RETAINING RECEPTOR	1	269	IPR000133	GO:0006621\|GO:0016021\|GO:0046923
	Psa4g4698	270	PANTHER	ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED	1	269	-	-
	Psa4g4698	270	Pfam	ER lumen protein retaining receptor	73	214	IPR000133	GO:0006621\|GO:0016021\|GO:0046923
	Psa4g4698	270	PRINTS	ER lumen protein retaining receptor signature	49	68	IPR000133	GO:0006621\|GO:0016021\|GO:0046923
	Psa4g4698	270	PRINTS	ER lumen protein retaining receptor signature	76	96	IPR000133	GO:0006621\|GO:0016021\|GO:0046923
	Psa4g4698	270	PRINTS	ER lumen protein retaining receptor signature	166	186	IPR000133	GO:0006621\|GO:0016021\|GO:0046923
	Psa4g4698	270	PRINTS	ER lumen protein retaining receptor signature	188	202	IPR000133	GO:0006621\|GO:0016021\|GO:0046923

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa4g4698	Psa-Chr4	416192533	416204896	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa4g4698	1	270	Miscellaneous Gene Families	AT3G25160	52.574	3.15e-101	295

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa4g4698	-		K10949	gmx:100790733	330.872